RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 EID2Q8N6I1 236 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 ZSCAN4Q8NAM6 433 aaPredicted RBP4.02□□□□□ -1.77
RTN4-215ENST00000491592 ZNF485Q8NCK3 441 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 VN1R2Q8NFZ6 395 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 OR10W1Q8NGF6 305 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 OR2T35Q8NGX2 323 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 FGFBP3Q8TAT2 258 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 C15orf40Q8WUR7 153 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 APOBEC4Q8WW27 367 aaKnown RBP4.02□□□□□ -1.77
RTN4-215ENST00000491592 OR8D1Q8WZ84 308 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 FGF11Q92914 225 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 NEIL2Q969S2 332 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 TMEM203Q969S6 136 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 FLYWCH2Q96CP2 140 aaKnown RBP4.02□□□□□ -1.77
RTN4-215ENST00000491592 LINC00052Q96N35 136 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 OR2A7Q96R45 310 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 KXD1Q9BQD3 176 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 REEP4Q9H6H4 257 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 TMEM27Q9HBJ8 222 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 A4GALTQ9NPC4 353 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 BIN3Q9NQY0 253 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 OCIAD1Q9NX40 245 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 TVP23BQ9NYZ1 205 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 TREM2Q9NZC2 230 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 MED11Q9P086 117 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 ABRACLQ9P1F3 81 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 RPS6KB2Q9UBS0 482 aa4.02□□□□□ -1.77
RTN4-215ENST00000491592 ZNF106Q9H2Y7 1883 aaKnown RBP4.02□□□□□ -1.77
RTN4-215ENST00000491592 CKAP5Q14008 2032 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 KIR2DS1A0A191URI9 304 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 hCG_38984A0A1B0GV85 526 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 ANKRD20A5PA0PJZ0 165 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 TSPAN11A1L157 253 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 TRAPPC13A5PLN9 417 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 C2CD4DB7Z1M9 353 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 C21orf140B9A014 251 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 MCRIP1C9JLW8 97 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 NEDD8-MDP1E9PL57 170 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 F5H768 121 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 F8W036 122 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GFYI3L273 518 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 DNASE2O00115 360 aaPredicted RBP4.01□□□□□ -1.77
RTN4-215ENST00000491592 EEF1E1O43324 174 aaKnown RBP4.01□□□□□ -1.77
RTN4-215ENST00000491592 SOX15O60248 233 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 CDC40O60508 579 aaKnown RBP eCLIP4.01□□□□□ -1.77
RTN4-215ENST00000491592 SLC16A7O60669 478 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 RAD1O60671 282 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 RP2O75695 350 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GAGE7O76087 117 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 TOXO94900 526 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 MPZL1O95297 269 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 CFDP00746 253 aaPredicted RBP4.01□□□□□ -1.77
RTN4-215ENST00000491592 MT-ND4P03905 459 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 OPN1SWP03999 348 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 RLN2P04090 185 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 CD5P06127 495 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 NMBP08949 121 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GAGE12FP0CL80 117 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GAGE12GP0CL81 117 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GAGE12IP0CL82 117 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 LIMS3P0CW19 117 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 LIMS4P0CW20 117 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 CXCL3P19876 107 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 PSMB1P20618 241 aaKnown RBP4.01□□□□□ -1.77
RTN4-215ENST00000491592 GDF1P27539 372 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 S100A11P31949 105 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 OPRD1P41143 372 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 NBL1P41271 181 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 PGFP49763 221 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 FGF8P55075 233 aaPredicted RBP4.01□□□□□ -1.77
RTN4-215ENST00000491592 MRPS10P82664 201 aaKnown RBP4.01□□□□□ -1.77
RTN4-215ENST00000491592 LTBQ06643 244 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 ZNF763Q0D2J5 394 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 CNTN1Q12860 1018 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GAGE1Q13065 139 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GAGE4Q13068 117 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 VGLL4Q14135 290 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GNMTQ14749 295 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 KIR2DS1Q14954 304 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 MPPED2Q15777 294 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 DEFB115Q30KQ5 88 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 HENMT1Q5T8I9 393 aaKnown RBP4.01□□□□□ -1.77
RTN4-215ENST00000491592 STEAP1BQ6NZ63 245 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 SLC25A48Q6ZT89 311 aaKnown RBP4.01□□□□□ -1.77
RTN4-215ENST00000491592 CHMP1BQ7LBR1 199 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 TPRX1Q8N7U7 411 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 C9orf106Q8NAJ2 232 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 HSD17B11Q8NBQ5 300 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GPR26Q8NDV2 337 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 OR2AK2Q8NG84 335 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 OR5L2Q8NGL0 311 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 OR5K2Q8NHB8 316 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 SYNPRQ8TBG9 265 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 SFXN5Q8TD22 340 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 GNPDA2Q8TDQ7 276 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 RND1Q92730 232 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 MAL2Q969L2 176 aa4.01□□□□□ -1.77
RTN4-215ENST00000491592 RERGQ96A58 199 aaPredicted RBP4.01□□□□□ -1.77
RTN4-215ENST00000491592 PPCDCQ96CD2 204 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms