RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 FAM106CPP0CH98 169 aa16.35■□□□□ 0.21
CLIP2-208ENST00000491075 DUSP1P28562 367 aa16.35■□□□□ 0.21
CLIP2-208ENST00000491075 GP2P55259 537 aaKnown RBP16.35■□□□□ 0.21
CLIP2-208ENST00000491075 CDC42P60953 191 aa16.35■□□□□ 0.21
CLIP2-208ENST00000491075 HS3ST5Q8IZT8 346 aa16.35■□□□□ 0.21
CLIP2-208ENST00000491075 FAM58AQ8N1B3 248 aa16.35■□□□□ 0.21
CLIP2-208ENST00000491075 KLHL30-AS1Q8NEE0 82 aa16.35■□□□□ 0.21
CLIP2-208ENST00000491075 TFAP2CQ92754 450 aa16.35■□□□□ 0.21
CLIP2-208ENST00000491075 CORO2AQ92828 525 aa16.35■□□□□ 0.21
CLIP2-208ENST00000491075 ZNF286AQ9HBT8 521 aa16.35■□□□□ 0.21
CLIP2-208ENST00000491075 MRM2Q9UI43 246 aaKnown RBP16.35■□□□□ 0.21
CLIP2-208ENST00000491075 ZNF670-ZNF695F2Z2N8 137 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 SYT7O43581 403 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 ENTPD6O75354 484 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 DCTN3O75935 186 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 ZFPL1O95159 310 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 CYB5AP00167 134 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 SERPINA3P01011 423 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 ADGRG5Q8IZF4 528 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 CCDC54Q8NEL0 328 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 ASB9Q96DX5 294 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 ADGRL4Q9HBW9 690 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 PCDHB16Q9NRJ7 776 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 CLN6Q9NWW5 311 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 ARL2BPQ9Y2Y0 163 aa16.34■□□□□ 0.21
CLIP2-208ENST00000491075 B2RBV5 119 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 LY6LH3BQJ8 138 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 PRKACAP17612 351 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 BCL3P20749 454 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 PRKACGP22612 351 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 NPBWR2P48146 333 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 RBP2P50120 134 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 PRRX1P54821 245 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 KPNB1Q14974 876 aaKnown RBP16.33■□□□□ 0.2
CLIP2-208ENST00000491075 ODF4Q2M2E3 257 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 C18orf65Q6ZTR6 163 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 MEPCEQ7L2J0 689 aaKnown RBP16.33■□□□□ 0.2
CLIP2-208ENST00000491075 COMMD1Q8N668 190 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 OR4D6Q8NGJ1 314 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 DNAJC9Q8WXX5 260 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 PRRG3Q9BZD7 231 aa16.33■□□□□ 0.2
CLIP2-208ENST00000491075 LSM4Q9Y4Z0 139 aaKnown RBP16.33■□□□□ 0.2
CLIP2-208ENST00000491075 A0A087X0M5 115 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 A0A1B0GX30 115 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 H3BSH0 61 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 SIRPB1O00241 398 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 PRKYO43930 277 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 RPP14O95059 124 aaKnown RBP16.32■□□□□ 0.2
CLIP2-208ENST00000491075 KRT8P05787 483 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 HOXB6P17509 224 aaKnown RBP16.32■□□□□ 0.2
CLIP2-208ENST00000491075 GDNFP39905 211 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 PTGFRP43088 359 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 CRISP1P54107 249 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 SNU13P55769 128 aaKnown RBP16.32■□□□□ 0.2
CLIP2-208ENST00000491075 SLC35B1P78383 322 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 RBM39Q14498 530 aaKnown RBP16.32■□□□□ 0.2
CLIP2-208ENST00000491075 NKAPLQ5M9Q1 402 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 CATSPERDQ86XM0 798 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 THNSL2Q86YJ6 484 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 DNAAF1Q8NEP3 725 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 C10orf35Q96D05 121 aa16.32■□□□□ 0.2
CLIP2-208ENST00000491075 NOL4LQ96MY1 436 aaPredicted RBP16.32■□□□□ 0.2
CLIP2-208ENST00000491075 EXOSC4Q9NPD3 245 aaKnown RBP16.32■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A18PA6NE21 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A16PA6NEW6 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A20PA6NIJ5 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A9PA6NNJ1 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A12PA8MX19 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A5PA8MXJ8 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 SH2D1BO14796 132 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A15PP0C7V4 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A13PP0C7W8 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A14PP0C7W9 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 FAM90A24PP0C7X0 464 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 GLIPR1P48060 266 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 POU3F4P49335 361 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 ATP1B3P54709 279 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 ZNF695Q8IW36 515 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 C5orf56Q8N8D9 126 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 YIPF7Q8N8F6 280 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 PP6455Q8WZ26 134 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 TOMM40LQ969M1 308 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 RPEQ96AT9 228 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 CCDC124Q96CT7 223 aaKnown RBP16.31■□□□□ 0.2
CLIP2-208ENST00000491075 ADI1Q9BV57 179 aa16.31■□□□□ 0.2
CLIP2-208ENST00000491075 H2AFY2Q9P0M6 372 aaPredicted RBP16.31■□□□□ 0.2
CLIP2-208ENST00000491075 DYNC2H1Q8NCM8 4307 aaKnown RBP16.3■□□□□ 0.2
CLIP2-208ENST00000491075 ODAMA1E959 279 aa16.3■□□□□ 0.2
CLIP2-208ENST00000491075 SERPINE3A8MV23 424 aa16.3■□□□□ 0.2
CLIP2-208ENST00000491075 FGF16O43320 207 aa16.3■□□□□ 0.2
CLIP2-208ENST00000491075 OR2H2O95918 312 aa16.3■□□□□ 0.2
CLIP2-208ENST00000491075 SNRNP70P08621 437 aaKnown RBP16.3■□□□□ 0.2
CLIP2-208ENST00000491075 AESQ08117 197 aa16.3■□□□□ 0.2
CLIP2-208ENST00000491075 NXNL2Q5VZ03 156 aa16.3■□□□□ 0.2
CLIP2-208ENST00000491075 BCDIN3DQ7Z5W3 292 aaKnown RBP16.3■□□□□ 0.2
CLIP2-208ENST00000491075 CANT1Q8WVQ1 401 aa16.3■□□□□ 0.2
CLIP2-208ENST00000491075 HMG20AQ9NP66 347 aa16.3■□□□□ 0.2
CLIP2-208ENST00000491075 AMMECR1Q9Y4X0 333 aaPredicted RBP16.3■□□□□ 0.2
CLIP2-208ENST00000491075 RYR2Q92736 4967 aa16.29■□□□□ 0.2
CLIP2-208ENST00000491075 ZNF729A6NN14 1252 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms