RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 C6orf47O95873 294 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 CD74P04233 296 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 IGHV3-43DP0DP04 118 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 ERGP11308 486 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 ATF1P18846 271 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 WARSP23381 471 aaKnown RBP2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 PYCR1P32322 319 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 MYCNOSP40205 109 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZNF136P52737 540 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 RAB4BP61018 213 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 TCP10Q12799 353 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR1Q1Q15612 314 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 TOMM34Q15785 309 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 MAPK14Q16539 360 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 C4orf26Q17RF5 130 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 CDNFQ49AH0 187 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 YIF1BQ5BJH7 314 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 METTL21CQ5VZV1 264 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 Q8N976 141 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR52E4Q8NGH9 312 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR6N1Q8NGY5 312 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 PIFOQ8TCI5 191 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 CASTOR1Q8WTX7 329 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 RXFP2Q8WXD0 754 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 RERGQ96A58 199 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 IMP4Q96G21 291 aaKnown RBP2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR2M4Q96R27 311 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 PITX2Q99697 317 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 NIPSNAP1Q9BPW8 284 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 TAPBPLQ9BX59 468 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 GABARAPL3Q9BY60 117 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 SLC22A4Q9H015 551 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 MS4A6AQ9H2W1 248 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 TRABDQ9H4I3 376 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 UGT1A7Q9HAW7 530 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 UGT1A8Q9HAW9 530 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZNF629Q9UEG4 869 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 CD84Q9UIB8 345 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZNF257Q9Y2Q1 563 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 SIGLEC9Q9Y336 463 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 NUP153P49790 1475 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 MYO10Q9HD67 2058 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 FLT4P35916 1363 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 EIF3AQ14152 1382 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 IGLV1-36A0A0B4J1U3 117 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 METTL15A6NJ78 407 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 LINC01619G3V211 115 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 FADS1O60427 444 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 CNIH1O95406 144 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 IGLV2-23P01705 113 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 MT-ND4P03905 459 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 MRPL3P09001 348 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 MMP7P09237 267 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 CD99P14209 185 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZNF823P16415 610 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 RAB3BP20337 219 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 RPL12P30050 165 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 SSTR5P35346 364 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 GGT2P36268 569 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 PMELP40967 661 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 SULT1A1P50225 295 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 SULT1A2P50226 295 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 RPS21P63220 83 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 RPL19P84098 196 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 BAXQ07812 192 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 KRR1Q13601 381 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 RSPO1Q2MKA7 263 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 CHRFAM7AQ494W8 412 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 TTC32Q5I0X7 151 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 AVPI1Q5T686 147 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 TRIQKQ629K1 86 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 UGT2A3Q6UWM9 527 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 FAM231DQ6ZW35 169 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 NIT1Q86X76 327 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 LGI3Q8N145 548 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 NPWQ8N729 165 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 UBAC2Q8NBM4 344 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR10G2Q8NGC3 310 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 HAVCR2Q8TDQ0 301 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 BLNKQ8WV28 456 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 HAUS1Q96CS2 278 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 DOK1Q99704 481 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 FAAP24Q9BTP7 215 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 TMED9Q9BVK6 235 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 SLIRPQ9GZT3 109 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 TLNRD1Q9H1K6 362 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 METTL17Q9H7H0 456 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 MYOZ1Q9NP98 299 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 TAS2R7Q9NYW3 318 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 GLTPQ9NZD2 209 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 NDRG2Q9UN36 371 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 ORC6Q9Y5N6 252 aa2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZNFX1Q9P2E3 1918 aaKnown RBP2.91□□□□□ -1.94
HMGB1P38-201ENST00000490557 CARMIL3Q8ND23 1372 aa2.9□□□□□ -1.94
HMGB1P38-201ENST00000490557 COL4A4P53420 1690 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 A0A1W2PQ67 120 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 H7C417 338 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 J3QT63 122 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 MYL12BO14950 172 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms