RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-206	ENST00000489853	HRAS	P01112	189 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	NGFR	P08138	427 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C8orf89	P0DMQ9	161 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ESD	P10768	282 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GNB3	P16520	340 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ACAA2	P42765	397 aa	Known RBP	4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GATA4	P43694	442 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RAB28	P51157	221 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RAB38	P57729	211 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TAS2R46	P59540	309 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	POLR2L	P62875	67 aa	Known RBP	4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	DUSP28	Q4G0W2	176 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LDLRAD2	Q5SZI1	272 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TCF24	Q7RTU0	167 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SPRED2	Q7Z698	418 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CXorf67	Q86X51	503 aa	Predicted RBP	4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MCEMP1	Q8IX19	187 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C20orf196	Q8IYI0	205 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FBXL14	Q8N1E6	418 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TMEM256	Q8N2U0	113 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR5D18	Q8NGL1	313 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR5L1	Q8NGL2	311 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR13G1	Q8NGZ3	307 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZPLD1	Q8TCW7	415 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	IL22RA2	Q969J5	263 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MRPL24	Q96A35	216 aa	Known RBP	4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	APH1A	Q96BI3	265 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC25A44	Q96H78	314 aa	Predicted RBP	4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF845	Q96IR2	970 aa	Predicted RBP	4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LOXL4	Q96JB6	756 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SGCZ	Q96LD1	299 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF681	Q96N22	645 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LRFN3	Q9BTN0	628 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CALHM2	Q9HA72	323 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ELOVL3	Q9HB03	270 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SOHLH2	Q9NX45	425 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PPIAL4A	Q9Y536	164 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CUL9	Q8IWT3	2517 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CEP290	O15078	2479 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CENPVL1	A0A0U1RR11	272 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CXorf51A	A0A1B0GTR3	108 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FEZF1	A0PJY2	475 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR6C6	A6NF89	314 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FAM90A27P	A6NNH2	459 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FAM166B	A8MTA8	275 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF814	B7Z6K7	855 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C9orf172	C9J069	976 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C22orf46	C9J442	243 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853		H3BSH0	61 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ST8SIA3	O43173	380 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PITX3	O75364	302 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PIAS2	O75928	621 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GJB5	O95377	273 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	DDAH2	O95865	285 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CTSD	P07339	412 aa	Predicted RBP	4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CD55	P08174	381 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	BCL2	P10415	239 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MMP9	P14780	707 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TUBG1	P23258	451 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PTGER4	P35408	488 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CTRL	P40313	264 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	HNRNPA3	P51991	378 aa	Known RBP	4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ERVS71-1	P61550	626 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	BTN3A2	P78410	334 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GNMT	Q14749	295 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	KIR3DS1	Q14943	382 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TCTN1	Q2MV58	587 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	BSX	Q3C1V8	233 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SNAI3	Q3KNW1	292 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C1QL3	Q5VWW1	255 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CST9LP1	Q5W188	147 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	WDR25	Q64LD2	544 aa	Predicted RBP	4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PRR27	Q6MZM9	219 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF793	Q6ZN11	406 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853		Q6ZWC4	215 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	DPY19L4	Q7Z388	723 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PNKD	Q8N490	385 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	METTL27	Q8N6F8	245 aa	Predicted RBP	4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	KLHDC1	Q8N7A1	406 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC38A9	Q8NBW4	561 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR5B3	Q8NH48	314 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR4S2	Q8NH73	311 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CMTM2	Q8TAZ6	248 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CPT1C	Q8TCG5	803 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ABHD3	Q8WU67	409 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GPR146	Q96CH1	333 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	DDIT4L	Q96D03	193 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RASD2	Q96D21	266 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLAMF6	Q96DU3	332 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LPAR5	Q9H1C0	372 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZDHHC6	Q9H6R6	413 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC35D1	Q9NTN3	355 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	EHF	Q9NZC4	300 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RBPJL	Q9UBG7	517 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	HHLA2	Q9UM44	414 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC22A13	Q9Y226	551 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RCL1	Q9Y2P8	373 aa	Known RBP	4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RHBDD3	Q9Y3P4	386 aa		4.15	□□□□□ -1.74
SNRNP40-206	ENST00000489853	B3GALT1	Q9Y5Z6	326 aa		4.15	□□□□□ -1.74

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