RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 DDI2Q5TDH0 399 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 Q6YL49 198 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 OR52N4Q8NGI2 321 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
CCL28-202ENST00000489442 NR1H4Q96RI1 486 aaPredicted RBP10.97□□□□□ -0.65
CCL28-202ENST00000489442 ANKRD60Q9BZ19 345 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 HEXA-AS1Q9H8Q6 139 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 UNKLQ9H9P5 680 aaKnown RBP10.97□□□□□ -0.65
CCL28-202ENST00000489442 SEBOXQ9HB31 216 aaPredicted RBP10.97□□□□□ -0.65
CCL28-202ENST00000489442 ING4Q9UNL4 249 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 SF3B6Q9Y3B4 125 aaKnown RBP10.97□□□□□ -0.65
CCL28-202ENST00000489442 TRBV5-5A0A0J9YX44 114 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 A0A1W2PPK0 400 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 hADV38S2A0JD32 116 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 MEX3AA1L020 520 aaKnown RBP10.96□□□□□ -0.65
CCL28-202ENST00000489442 CLDN34H7C241 214 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 GABRPO00591 440 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 MGST3O14880 152 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 DEGS1O15121 323 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 ATP6V1G2O95670 118 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 OR2H2O95918 312 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 ALDOBP05062 364 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 RNASE1P07998 156 aaKnown RBP10.96□□□□□ -0.65
CCL28-202ENST00000489442 FBP1P09467 338 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 CCL3L1P16619 93 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 ZNF93P35789 620 aaPredicted RBP10.96□□□□□ -0.65
CCL28-202ENST00000489442 ERVFRD-1P60508 538 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 ZP1P60852 638 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 ZNF273Q14593 569 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 MED22Q15528 200 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 ZNF529Q6P280 563 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 C17orf107Q6ZR85 190 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 PXT1Q8NFP0 134 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 SSMEM1Q8WWF3 244 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 TNFRSF14Q92956 283 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 ORAI1Q96D31 301 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 PGLYRP3Q96LB9 341 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 CNBD2Q96M20 576 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 OR14A2Q96R54 314 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 PRDM13Q9H4Q3 707 aa10.96□□□□□ -0.65
CCL28-202ENST00000489442 FUOMA2VDF0 154 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 PSPNO60542 156 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 HTR3BO95264 441 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 CSTBP04080 98 aaKnown RBP10.95□□□□□ -0.66
CCL28-202ENST00000489442 CRYBA1P05813 215 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 MELTFP08582 738 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 ZNF728P0DKX0 622 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 TGFBR2P37173 567 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 PTGFRP43088 359 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 MTNR1BP49286 362 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 LGALS4P56470 323 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 BDH1Q02338 343 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 MEF2CQ06413 473 aaPredicted RBP10.95□□□□□ -0.66
CCL28-202ENST00000489442 ACSM1Q08AH1 577 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 SPHARQ15513 63 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 RNLSQ5VYX0 342 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 ASPHD2Q6ICH7 369 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 C16orf87Q6PH81 154 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 CRIP3Q6Q6R5 217 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 TRAPPC6BQ86SZ2 158 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 PNKDQ8N490 385 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 TPRX1Q8N7U7 411 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 CHST4Q8NCG5 386 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 OR4S1Q8NGB4 309 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 THRSPQ92748 146 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 ZNF184Q99676 751 aaPredicted RBP10.95□□□□□ -0.66
CCL28-202ENST00000489442 CDCA4Q9BXL8 241 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 CCDC90BQ9GZT6 254 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 METTL9Q9H1A3 318 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 DPAGT1Q9H3H5 408 aa10.95□□□□□ -0.66
CCL28-202ENST00000489442 TMEM89A2RUT3 159 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 BTBD17A6NE02 478 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 RGS10O43665 173 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 CDRT1O95170 752 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 CD1AP06126 327 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 COX7A1P24310 79 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 MAPK3P27361 379 aaPredicted RBP10.94□□□□□ -0.66
CCL28-202ENST00000489442 SAA4P35542 130 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 VHLP40337 213 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 OR3A4PP47883 348 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 RPS11P62280 158 aaKnown RBP eCLIP10.94□□□□□ -0.66
CCL28-202ENST00000489442 SLC35A2P78381 396 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 FOXL1Q12952 345 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 ZNF782Q6ZMW2 699 aaPredicted RBP10.94□□□□□ -0.66
CCL28-202ENST00000489442 JAGN1Q8N5M9 183 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 MS4A15Q8N5U1 240 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 TMEM86BQ8N661 226 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 OR10K1Q8NGX5 313 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 ZNF714Q96N38 554 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 NKX3-1Q99801 234 aaPredicted RBP10.94□□□□□ -0.66
CCL28-202ENST00000489442 PPA2Q9H2U2 334 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 PCDHB16Q9NRJ7 776 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 PAK1IP1Q9NWT1 392 aaPredicted RBP10.94□□□□□ -0.66
CCL28-202ENST00000489442 POMT1Q9Y6A1 747 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 LINC00312Q9Y6C7 94 aa10.94□□□□□ -0.66
CCL28-202ENST00000489442 TRAV8-7A0A075B6U6 113 aa10.93□□□□□ -0.66
CCL28-202ENST00000489442 A0A0G2JK05 382 aa10.93□□□□□ -0.66
CCL28-202ENST00000489442 GPX5O75715 221 aa10.93□□□□□ -0.66
CCL28-202ENST00000489442 MAS1P04201 325 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms