RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SPIN3Q5JUX0 258 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 ZNF626Q68DY1 528 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 TRAPPC6BQ86SZ2 158 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 TMEM219Q86XT9 240 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 SYS1Q8N2H4 156 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 PQLC1Q8N2U9 271 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 OR52I1Q8NGK6 324 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 OR2T6Q8NHC8 308 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 FOXRED1Q96CU9 486 aaPredicted RBP9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 MYCBPQ99417 103 aaPredicted RBP9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 ZNF649Q9BS31 505 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 NPFFR1Q9GZQ6 430 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 EXOSC4Q9NPD3 245 aaKnown RBP9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 ABCB10Q9NRK6 738 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 ERVK13-1Q9NX77 482 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 HILPDAQ9Y5L2 63 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 LINC00312Q9Y6C7 94 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 SESN1Q9Y6P5 492 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 IGHV2-26A0A0B4J1V2 119 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 A0A0G2JK05 382 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 A6NDX4 124 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 KDM4BO94953 1096 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 HCKP08631 526 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 CSF1P09603 554 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 TMEM225BP0DP42 221 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 VSIG10L2P0DP72 767 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 GBX2P52951 348 aaPredicted RBP9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 AESQ08117 197 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 RAB40BQ12829 278 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 HABP2Q14520 560 aaPredicted RBP9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 C2orf68Q2NKX9 166 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 PDLIM3Q53GG5 364 aaPredicted RBP9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 BAIAP2L2Q6UXY1 529 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 LIAT1Q6ZQX7 453 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 Q6ZTK2 550 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 SERPINA12Q8IW75 414 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 KLHDC1Q8N7A1 406 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 OR5D14Q8NGL3 314 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 OR5AK2Q8NH90 309 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 RPS4Y2Q8TD47 263 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 PDCD1LG2Q9BQ51 273 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 TMEM133Q9H2Q1 129 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 RANBP3Q9H6Z4 567 aaPredicted RBP9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 INPP5EQ9NRR6 644 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 ING3Q9NXR8 418 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 TCF19Q9Y242 345 aa9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 RPL36Q9Y3U8 105 aaKnown RBP9.63□□□□□ -0.87
CCHCR1-215ENST00000488920 TMEM212A6NML5 194 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 EBAG9O00559 213 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 DEGS1O15121 323 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 ZNF44P15621 663 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 LMO1P25800 156 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 ERP29P30040 261 aaKnown RBP9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 GLIPR1P48060 266 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 GTF2A1P52655 376 aaPredicted RBP9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 SLC34A1Q06495 639 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 IL18R1Q13478 541 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 KISS1Q15726 138 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 SMN1Q16637 294 aaKnown RBP9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 PRAMEF5Q5TYX0 476 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 Q6P435 159 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 C11orf88Q6PI97 169 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 SAXO1Q8IYX7 474 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 PARP16Q8N5Y8 322 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 NDNFQ8TB73 568 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 APH1BQ8WW43 257 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 CLEC7AQ9BXN2 247 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 COMMD4Q9H0A8 199 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 ZNF702PQ9H963 129 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 MRPS18AQ9NVS2 196 aaKnown RBP9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 DHDHQ9UQ10 334 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 UBE2J1Q9Y385 318 aaPredicted RBP9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 PCDHGB5Q9Y5G0 923 aa9.62□□□□□ -0.87
CCHCR1-215ENST00000488920 TRGV10A0A0A0MS01 117 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 F2RL2O00254 374 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 SULT1B1O43704 296 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 CCDC159P0C7I6 412 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 LIMS3P0CW19 117 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 LIMS4P0CW20 117 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 CDK2P24941 298 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 SOX2P48431 317 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 ZP1P60852 638 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 KLHL22Q53GT1 634 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 MINOS1Q5TGZ0 78 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 ZNF691Q5VV52 312 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 LPCAT4Q643R3 524 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 SATL1Q86VE3 508 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 C1QL4Q86Z23 238 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 LYG1Q8N1E2 194 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 ABHD12Q8N2K0 398 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 DTX3Q8N9I9 347 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 CFHR4Q92496 578 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 CORO2AQ92828 525 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 NR1H4Q96RI1 486 aaPredicted RBP9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 CDCA4Q9BXL8 241 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 RHOFQ9HBH0 211 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 MINOS1-NBL1R4GNA1 71 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 WNK1Q9H4A3 2382 aa9.61□□□□□ -0.87
CCHCR1-215ENST00000488920 ODAMA1E959 279 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms