RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 UTS2BQ765I0 119 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 RDH10Q8IZV5 341 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 ABHD12Q8N2K0 398 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 WFDC9Q8NEX5 89 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 ZNF596Q8TC21 504 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 DPM3Q9P2X0 92 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 GLS2Q9UI32 602 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 TRGV10A0A0A0MS01 117 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 ZNF20P17024 532 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 PRKACBP22694 351 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 CD24P25063 80 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 FASP25445 335 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 BRS3P32247 399 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 ARHGDIBP52566 201 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 ZNF85Q03923 595 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 TMED1Q13445 227 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 TCTEX1D4Q5JR98 221 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 OR52W1Q6IF63 320 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 HEPN1Q6WQI6 88 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 RTN4RL2Q86UN3 420 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 OR8J1Q8NGP2 316 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 CAPSLQ8WWF8 208 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 RNF166Q96A37 237 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-231ENST00000488905 SPSB1Q96BD6 273 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 SLC25A33Q9BSK2 321 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 GABARAPL3Q9BY60 117 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 HMG20AQ9NP66 347 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 EXOSC4Q9NPD3 245 aaKnown RBP14.72□□□□□ -0.05
HDAC6-231ENST00000488905 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-231ENST00000488905 GSTK1Q9Y2Q3 226 aa14.72□□□□□ -0.05
HDAC6-231ENST00000488905 TSSC4Q9Y5U2 329 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-231ENST00000488905 NBEAL2Q6ZNJ1 2754 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 FAM172BPA6NC97 362 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 OR2H2O95918 312 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 IGLV1-47P01700 117 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 PF4P02776 101 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 ATF1P18846 271 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 CDK2P24941 298 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 POLR2IP36954 125 aaKnown RBP14.71□□□□□ -0.05
HDAC6-231ENST00000488905 PDZK1IP1Q13113 114 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 TMEM244Q5VVB8 128 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 CCDC121Q6ZUS5 278 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 CENPVQ7Z7K6 275 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-231ENST00000488905 AMIGO2Q86SJ2 522 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 OR2G2Q8NGZ5 317 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 RFKQ969G6 155 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 RFT1Q96AA3 541 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 EME1Q96AY2 570 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 OPALINQ96PE5 141 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 RIBC2Q9H4K1 309 aa14.71□□□□□ -0.05
HDAC6-231ENST00000488905 IGKV1-12A0A0C4DH73 117 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 TCRBV4S1A1TA0A5B7 111 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 FUOMA2VDF0 154 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 SH2D1BO14796 132 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 OR2F2O95006 317 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 MPIG6BO95866 241 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 IGKV1D-12P01611 117 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 LPLP06858 475 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 CD34P28906 385 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 SLC35A2P78381 396 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 ABCA11PQ4W5N1 156 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 OR4X2Q8NGF9 303 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 CORO2AQ92828 525 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 MYDGFQ969H8 173 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 FGGYQ96C11 551 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 RBM14Q96PK6 669 aaKnown RBP14.7□□□□□ -0.06
HDAC6-231ENST00000488905 MBOAT4Q96T53 435 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 COMMD4Q9H0A8 199 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 ZNF286AQ9HBT8 521 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 TAS2R3Q9NYW6 316 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 AP4S1Q9Y587 144 aa14.7□□□□□ -0.06
HDAC6-231ENST00000488905 LEUTXA8MZ59 168 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 KDM4BO94953 1096 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 ISG15P05161 165 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 OCM2P0CE71 109 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 OCMP0CE72 109 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-231ENST00000488905 FCGR1AP12314 374 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 GDNFP39905 211 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 PTGFRP43088 359 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 GLIPR1P48060 266 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 AESQ08117 197 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 HLA-DRB5Q30154 266 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 BCAS4Q8TDM0 211 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 STMN2Q93045 179 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 FRRS1LQ9P0K9 344 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 PCDHGB5Q9Y5G0 923 aa14.69□□□□□ -0.06
HDAC6-231ENST00000488905 ODAMA1E959 279 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 CSN2P05814 226 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 ZNF44P15621 663 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 LMO1P25800 156 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 CEACAM3P40198 252 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 NANOS3P60323 173 aaKnown RBP14.68□□□□□ -0.06
HDAC6-231ENST00000488905 KHDC1LQ5JSQ8 128 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 TPTE2P1Q5T6R2 138 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 OR5D18Q8NGL1 313 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 CREB3L1Q96BA8 519 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 RCC1LQ96I51 464 aaKnown RBP14.68□□□□□ -0.06
HDAC6-231ENST00000488905 SPACA5Q96QH8 159 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 HHLA2Q9UM44 414 aa14.68□□□□□ -0.06
HDAC6-231ENST00000488905 OAZ3Q9UMX2 235 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms