RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 GRIN2BQ13224 1484 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 PBRM1Q86U86 1689 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 MARF1Q9Y4F3 1742 aaKnown RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 ATP7AQ04656 1500 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ABCB11O95342 1321 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 UGGT1Q9NYU2 1555 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 NID2Q14112 1375 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ECM29Q5VYK3 1845 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 PHIPQ8WWQ0 1821 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CAMSAP1Q5T5Y3 1602 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 ZFYVE9O95405 1425 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 KIF1AQ12756 1690 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 RLFQ13129 1914 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 KIR2DL5BA0A0G2JN68 375 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 KIR2DL5BA0A0G2JPC4 375 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 GNG14A0A1W2PPG7 69 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TVP23AA6NH52 213 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 KRBOX1C9JBD0 128 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 E5RI56 91 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 H7C2Y5 167 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 DNASE2O00115 360 aaPredicted RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 KCNK1O00180 336 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CCL21O00585 134 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 RGS5O15539 181 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 EEDO75530 441 aaKnown RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 EIF3GO75821 320 aaKnown RBP eCLIP2.35□□□□□ -2.03
SSR1-209ENST00000488834 UPK1BO75841 260 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TDP2O95551 362 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 HBE1P02100 147 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CD3GP09693 182 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CD36P16671 472 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 HLA-GP17693 338 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 OGNP20774 298 aaKnown RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 HLA-DMAP28067 261 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 ARR3P36575 388 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CXCL5P42830 114 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 MAGEA2P43356 314 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 GPR6P46095 362 aaPredicted RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 OMPP47874 163 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 UBE2AP49459 152 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 XKP51811 444 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CLDN6P56747 220 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 SEMG2Q02383 582 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TSPAN31Q12999 210 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TPBGQ13641 420 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TFDP2Q14188 446 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 MAD2L1BPQ15013 274 aaPredicted RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 IRF4Q15306 451 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TOMM34Q15785 309 aaPredicted RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 ZBTB6Q15916 424 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TMEM183BQ1AE95 376 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 DEFB115Q30KQ5 88 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CHRFAM7AQ494W8 412 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 COQ5Q5HYK3 327 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 RPL13AP3Q6NVV1 102 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 FAHD1Q6P587 224 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 WDR59Q6PJI9 974 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 AHSA2Q719I0 299 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 SSX6Q7RTT6 188 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 PHF13Q86YI8 300 aaPredicted RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 TMEM183AQ8IXX5 376 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 PRSS58Q8IYP2 241 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TCTE3Q8IZS6 198 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 KIR2DL5AQ8N109 375 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 ARRDC1Q8N5I2 433 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CYB561D1Q8N8Q1 229 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 LINC00301Q8NCQ3 95 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 C19orf18Q8NEA5 215 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 OR4M1Q8NGD0 313 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 OR51F2Q8NH61 342 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 PHF10Q8WUB8 498 aaKnown RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 RAB2BQ8WUD1 216 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 SFT2D1Q8WV19 159 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 OR8D1Q8WZ84 308 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 RBPMSQ93062 196 aaKnown RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 DCPSQ96C86 337 aaKnown RBP2.35□□□□□ -2.03
SSR1-209ENST00000488834 DNAJC19Q96DA6 116 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 C14orf144Q96I85 54 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 RBBP8Q99708 897 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 MICU1Q9BPX6 476 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 PDCD10Q9BUL8 212 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TMED9Q9BVK6 235 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 FAIM2Q9BWQ8 316 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 OSBPL11Q9BXB4 747 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CWH43Q9H720 699 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 EFCAB1Q9HAE3 211 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 PLEKHA1Q9HB21 404 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 LHX9Q9NQ69 397 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 NIT2Q9NQR4 276 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 XPNPEP1Q9NQW7 623 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 MCUBQ9NWR8 336 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 SDHAF2Q9NX18 166 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 LGALS13Q9UHV8 139 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 V9GYQ6 96 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.35□□□□□ -2.038e-6■□□□□ 10.5
SSR1-209ENST00000488834 KIAA0586Q9BVV6 1533 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 ADAMTS12P58397 1594 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 TTC37Q6PGP7 1564 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 ARHGEF10O15013 1369 aa2.35□□□□□ -2.03
SSR1-209ENST00000488834 CCDC88AQ3V6T2 1871 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms