RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SRMP19623 302 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 EPHA1P21709 976 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 GALP22466 123 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 DUSP1P28562 367 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 OR3A1P47881 315 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 SYT6Q5T7P8 510 aaPredicted RBP15.34■□□□□ 0.05
PTCD3-217ENST00000488801 C1orf122Q6ZSJ8 110 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 C9orf139Q6ZV77 190 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 TCF23Q7RTU1 214 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 ASCC1Q8N9N2 400 aaKnown RBP15.34■□□□□ 0.05
PTCD3-217ENST00000488801 CHST4Q8NCG5 386 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 OR4D6Q8NGJ1 314 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 OR10K1Q8NGX5 313 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 H1FXQ92522 213 aaKnown RBP15.34■□□□□ 0.05
PTCD3-217ENST00000488801 GFI1Q99684 422 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 FAM192AQ9GZU8 254 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 IFT22Q9H7X7 185 aa15.34■□□□□ 0.05
PTCD3-217ENST00000488801 EXOSC4Q9NPD3 245 aaKnown RBP15.34■□□□□ 0.05
PTCD3-217ENST00000488801 TRAV40A0A0B4J280 105 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 TRIM64CA6NLI5 447 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 M0R1W7 72 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 SLC33A1O00400 549 aaPredicted RBP15.33■□□□□ 0.04
PTCD3-217ENST00000488801 CCRL2O00421 344 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 CSN2P05814 226 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 CAPZA1P52907 286 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 SNU13P55769 128 aaKnown RBP15.33■□□□□ 0.04
PTCD3-217ENST00000488801 RSU1Q15404 277 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 C1orf100Q5SVJ3 147 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 METTL11BQ5VVY1 283 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 METAP1DQ6UB28 335 aaPredicted RBP15.33■□□□□ 0.04
PTCD3-217ENST00000488801 JAGN1Q8N5M9 183 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 C11orf42Q8N5U0 333 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 OR4S1Q8NGB4 309 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 TBC1D15Q8TC07 691 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 MUL1Q969V5 352 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 METTL9Q9H1A3 318 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 ZNF696Q9H7X3 374 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 TCF7L1Q9HCS4 588 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 NUP50Q9UKX7 468 aa15.33■□□□□ 0.04
PTCD3-217ENST00000488801 MRPS28Q9Y2Q9 187 aaKnown RBP15.33■□□□□ 0.04
PTCD3-217ENST00000488801 TRDV1A0A1B0GX56 115 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 A0A1W2PP11 408 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 SH2D1BO14796 132 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 ZNF780AO75290 641 aaPredicted RBP15.32■□□□□ 0.04
PTCD3-217ENST00000488801 TOX4O94842 621 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 TNFAIP8O95379 198 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 ERP29P30040 261 aaKnown RBP15.32■□□□□ 0.04
PTCD3-217ENST00000488801 DLX6P56179 175 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 RBM11P57052 281 aaKnown RBP15.32■□□□□ 0.04
PTCD3-217ENST00000488801 ARF6P62330 175 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 RPL31P62899 125 aaKnown RBP15.32■□□□□ 0.04
PTCD3-217ENST00000488801 PAX5Q02548 391 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 PIGYQ3MUY2 71 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 OR5D13Q8NGL4 314 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 TNFRSF14Q92956 283 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 GLS2Q9UI32 602 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 COL6A5A8TX70 2615 aa15.32■□□□□ 0.04
PTCD3-217ENST00000488801 A0A0G2JK05 382 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 SHISA3A0PJX4 238 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 SIRPB1O00241 398 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 MGST3O14880 152 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 ARL6IP5O75915 188 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 PSMB9P28065 219 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 SCGB2A2Q13296 93 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 ZNF273Q14593 569 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 TMEM200BQ69YZ2 307 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 LINC00596Q86U02 117 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 OSR2Q8N2R0 312 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 FOXRED1Q96CU9 486 aaPredicted RBP15.31■□□□□ 0.04
PTCD3-217ENST00000488801 PCGF1Q9BSM1 259 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 ZNF581Q9P0T4 197 aa15.31■□□□□ 0.04
PTCD3-217ENST00000488801 TRAV24A0A0B4J272 114 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 CENPVL3A0A0U1RRI6 287 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 SLC22A1O15245 554 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 HTR3BO95264 441 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 SERPINA2P20848 420 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 CFPP27918 469 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 MEF2CQ06413 473 aaPredicted RBP15.3■□□□□ 0.04
PTCD3-217ENST00000488801 GPR176Q14439 515 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 PDCD1Q15116 288 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 GRK1Q15835 563 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 GLT8D1Q68CQ7 371 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 AWAT2Q6E213 333 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 GLIPR1L1Q6UWM5 242 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 VMO1Q7Z5L0 202 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 FAM185AQ8N0U4 392 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 MRPS24Q96EL2 167 aaKnown RBP15.3■□□□□ 0.04
PTCD3-217ENST00000488801 CHST6Q9GZX3 395 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 ONECUT1Q9UBC0 465 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 ZNF69Q9UC07 566 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 ING4Q9UNL4 249 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 ST3GAL6Q9Y274 331 aa15.3■□□□□ 0.04
PTCD3-217ENST00000488801 FBN1P35555 2871 aaKnown RBP15.29■□□□□ 0.04
PTCD3-217ENST00000488801 A0A1W2PQ09 198 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 IFNA2P01563 188 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 ZNF44P15621 663 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 GABRR1P24046 479 aa15.29■□□□□ 0.04
PTCD3-217ENST00000488801 CALRP27797 417 aaKnown RBP15.29■□□□□ 0.04
PTCD3-217ENST00000488801 FGF9P31371 208 aaPredicted RBP15.29■□□□□ 0.04
PTCD3-217ENST00000488801 MPV17LQ2QL34 196 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms