RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TAS2R43P59537 309 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 ELP2Q6IA86 826 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 FIP1L1Q6UN15 594 aaKnown RBP13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 C12orf54Q6X4T0 127 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 GDPD3Q7L5L3 318 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 SSMEM1Q8WWF3 244 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 NKX3-1Q99801 234 aaPredicted RBP13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 CDCA4Q9BXL8 241 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 ANKRD60Q9BZ19 345 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 CHIAQ9BZP6 476 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 CHST6Q9GZX3 395 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 TMEM138Q9NPI0 162 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 SF3B6Q9Y3B4 125 aaKnown RBP13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 POMT1Q9Y6A1 747 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 A0A0G2JK05 382 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 A0A1W2PPH5 198 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 MEX3AA1L020 520 aaKnown RBP13□□□□□ -0.33
CTDSP1-209ENST00000488627 SH2D1BO14796 132 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 IGHV4-59P01825 116 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 ZNF728P0DKX0 622 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 GABRR1P24046 479 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 EDDM3BP56851 147 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 SLC35A2P78381 396 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 MEF2CQ06413 473 aaPredicted RBP13□□□□□ -0.33
CTDSP1-209ENST00000488627 ACSM1Q08AH1 577 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 GRK1Q15835 563 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 Q499Y3 187 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 AWAT1Q58HT5 328 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 SATL1Q86VE3 508 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 TPRX1Q8N7U7 411 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 C17orf50Q8WW18 174 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 DUSP21Q9H596 190 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 EXOSC4Q9NPD3 245 aaKnown RBP13□□□□□ -0.33
CTDSP1-209ENST00000488627 TNFRSF19Q9NS68 423 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 GLS2Q9UI32 602 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 ERGIC3Q9Y282 383 aa13□□□□□ -0.33
CTDSP1-209ENST00000488627 LSM2Q9Y333 95 aaKnown RBP13□□□□□ -0.33
CTDSP1-209ENST00000488627 TRAV8-7A0A075B6U6 113 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 PNMA8CA0A1B0GUJ8 204 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 MEIOCA2RUB1 952 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 MAGEA13PA6NCF6 341 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 FAM181BA6NEQ2 426 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 SIRPB1O00241 398 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 MGST3O14880 152 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 MYL12BO14950 172 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 PIN1P1O15428 100 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 FBP1P09467 338 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 CELP19835 753 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 CFPP27918 469 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 ERP29P30040 261 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 PTGFRP43088 359 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 MTNR1BP49286 362 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 BDH1Q02338 343 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 RIPK1Q13546 671 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 EDDM3AQ14507 147 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 IRF3Q14653 427 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 TNFAIP8L1Q8WVP5 186 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 HEXA-AS1Q9H8Q6 139 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 ZNRD1Q9P1U0 126 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 FAM96BQ9Y3D0 163 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 PCDHGB5Q9Y5G0 923 aa12.99□□□□□ -0.33
CTDSP1-209ENST00000488627 A0A1W2PPK0 400 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 hADV38S2A0JD32 116 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 SLC33A1O00400 549 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 MAGEB3O15480 346 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 RBP4P02753 201 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 FSTP19883 344 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 BDKRB2P30411 391 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 OR3A4PP47883 348 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 P2RX3P56373 397 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 PPP3R1P63098 170 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 FOXL1Q12952 345 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 TAF9Q16594 264 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 MIDNQ504T8 468 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 IZUMO2Q6UXV1 221 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 OR51T1Q8NGJ9 327 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 MYDGFQ969H8 173 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 CPNE2Q96FN4 548 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 DERL3Q96Q80 235 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 OR14A2Q96R54 314 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 OR5M11Q96RB7 305 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 GPER1Q99527 375 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 LINC00312Q9Y6C7 94 aa12.98□□□□□ -0.33
CTDSP1-209ENST00000488627 TENM1Q9UKZ4 2725 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 hCG_1809904A0A1W2PP81 198 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 A0A1W2PPE2 198 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 A0A1W2PR64 198 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 A0A1W2PRV1 198 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 H0YHG0 523 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 DEGS1O15121 323 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 CDRT1O95170 752 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 CSN2P05814 226 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 ZNF93P35789 620 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 TGFBR2P37173 567 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 BMXP51813 675 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 RELBQ01201 579 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 SCN1BQ07699 218 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 SPHARQ15513 63 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 DDI2Q5TDH0 399 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms