RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 PIGYQ3MUY2 71 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 WDR25Q64LD2 544 aaPredicted RBP12.34□□□□□ -0.43
COL16A1-214ENST00000488128 DOK3Q7L591 496 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 DPPA2Q7Z7J5 298 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 FBXL14Q8N1E6 418 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 KDF1Q8NAX2 398 aaPredicted RBP12.34□□□□□ -0.43
COL16A1-214ENST00000488128 MVB12AQ96EY5 273 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 BOD1Q96IK1 185 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 THOC3Q96J01 351 aaKnown RBP12.34□□□□□ -0.43
COL16A1-214ENST00000488128 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 LURAP1Q96LR2 239 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 WNT16Q9UBV4 365 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 WASF3Q9UPY6 502 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
COL16A1-214ENST00000488128 DMDP11532 3685 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 FOXI3A8MTJ6 420 aaPredicted RBP12.34□□□□□ -0.43
COL16A1-214ENST00000488128 IGFBP4P22692 258 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 TUBG1P23258 451 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 PPA1Q15181 289 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 HIST1H2BLQ99880 126 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 MRPL13Q9BYD1 178 aaKnown RBP12.34□□□□□ -0.43
COL16A1-214ENST00000488128 PNRC2Q9NPJ4 139 aaKnown RBP12.34□□□□□ -0.43
COL16A1-214ENST00000488128 KLRF1Q9NZS2 232 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 PRRC2CQ9Y520 2896 aaKnown RBP12.34□□□□□ -0.43
COL16A1-214ENST00000488128 A0A1W2PQD3 144 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 ZNHIT1O43257 154 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 HLA-HP01893 362 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 FOLR1P15328 257 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 FASLGP48023 281 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 FGF8P55075 233 aaPredicted RBP12.33□□□□□ -0.44
COL16A1-214ENST00000488128 SPIN3Q5JUX0 258 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 LIAT1Q6ZQX7 453 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 OR1N1Q8NGS0 311 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 OR14L1PQ8NHC6 308 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 NAT6Q93015 286 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 TVP23CQ96ET8 276 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 GLRX2Q9NS18 164 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 CA14Q9ULX7 337 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 IGKV3D-11A0A0A0MRZ8 115 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 IGHV1OR15-9A0A0B4J2B8 117 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 H3BMH7 237 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 TERTO14746 1132 aaKnown RBP12.33□□□□□ -0.44
COL16A1-214ENST00000488128 CYTIPO60759 359 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 IGHG1P01857 330 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 CD55P08174 381 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 PGA3P0DJD8 388 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 LMO1P25800 156 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 CD38P28907 300 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 DYNLT3P51808 116 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 PKIAP61925 76 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 THEM4Q5T1C6 240 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 GPR157Q5UAW9 335 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 LRP11Q86VZ4 500 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 DDIT4LQ96D03 193 aa12.33□□□□□ -0.44
COL16A1-214ENST00000488128 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
COL16A1-214ENST00000488128 IGHV3-15A0A0B4J1V0 119 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 SMCO3A2RU48 225 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 IFNL4K9M1U5 179 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 SOX15O60248 233 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 IGLV3-19P01714 112 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 MAS1LP35410 378 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 SUCLG1P53597 346 aaKnown RBP12.32□□□□□ -0.44
COL16A1-214ENST00000488128 OR1D5P58170 312 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 TAS2R60P59551 318 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 ZNF154Q13106 437 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 OR8G1Q15617 311 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 LFNGQ8NES3 379 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 WFIKKN1Q96NZ8 548 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 COL6A3P12111 3177 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 ARL4DP49703 201 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 LCN15Q6UWW0 184 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 STX12Q86Y82 276 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 LGI3Q8N145 548 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 NOXO1Q8NFA2 376 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 NECAP2Q9NVZ3 263 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 COL4A2P08572 1712 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 BLACEA4D250 179 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 PROB1E7EW31 1015 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 OR2J2O76002 312 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 PTBP3O95758 552 aaKnown RBP12.32□□□□□ -0.44
COL16A1-214ENST00000488128 SPINK2P20155 84 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 GLIPR1P48060 266 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 SNAI3Q3KNW1 292 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 FAM69BQ5VUD6 431 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 SSC4DQ8WTU2 575 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 ZNF576Q9H609 170 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 CALHM2Q9HA72 323 aa12.32□□□□□ -0.44
COL16A1-214ENST00000488128 TMEM50AO95807 157 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 RNF4P78317 190 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 ZP4Q12836 540 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 IZUMO4Q1ZYL8 232 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 HIST2H3PS2Q5TEC6 136 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 CMTM1Q8IZ96 169 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 PLPP5Q8NEB5 264 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 C18orf12Q96KH6 178 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 SLC25A31Q9H0C2 315 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 SDHAF3Q9NRP4 125 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 DOCK11Q5JSL3 2073 aa12.31□□□□□ -0.44
COL16A1-214ENST00000488128 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
COL16A1-214ENST00000488128 CD200P41217 278 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms