RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 NPFFR1Q9GZQ6 430 aa9.04□□□□□ -0.96
RAB11FIP3-210ENST00000487899 COMMD4Q9H0A8 199 aa9.04□□□□□ -0.96
RAB11FIP3-210ENST00000487899 SERTAD4Q9NUC0 356 aa9.04□□□□□ -0.96
RAB11FIP3-210ENST00000487899 ERVK13-1Q9NX77 482 aa9.04□□□□□ -0.96
RAB11FIP3-210ENST00000487899 SESN1Q9Y6P5 492 aa9.04□□□□□ -0.96
RAB11FIP3-210ENST00000487899 hADV38S2A0JD32 116 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 LIMS3P0CW19 117 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 LIMS4P0CW20 117 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 PEX2P28328 305 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 ERP29P30040 261 aaKnown RBP9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 GDNFP39905 211 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 RAB13P51153 203 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 DYNLT3P51808 116 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 IL18R1Q13478 541 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 HERPUD1Q15011 391 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 FAM189A2Q15884 450 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 SSX2Q16385 188 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 PRAMEF5Q5TYX0 476 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 C11orf88Q6PI97 169 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 CCDC121Q6ZUS5 278 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 PQLC1Q8N2U9 271 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 ZNF676Q8N7Q3 588 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 OR52I1Q8NGK6 324 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 OR2T6Q8NHC8 308 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 RHOXF1Q8NHV9 184 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 RPS4Y2Q8TD47 263 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 COQ2Q96H96 371 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 PDCD1LG2Q9BQ51 273 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 C9orf16Q9BUW7 83 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 TMEM133Q9H2Q1 129 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 S100A14Q9HCY8 104 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 AMBNQ9NP70 447 aa9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 EXOSC4Q9NPD3 245 aaKnown RBP9.03□□□□□ -0.96
RAB11FIP3-210ENST00000487899 FAM172BPA6NC97 362 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 TMEM212A6NML5 194 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 SNTNA6NMZ2 147 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 SULT1B1O43704 296 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 WBP4O75554 376 aaKnown RBP9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 CYB5AP00167 134 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 CSN2P05814 226 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 LMO1P25800 156 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 RAB40BQ12829 278 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 CDK5R1Q15078 307 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 SMN1Q16637 294 aaKnown RBP9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 TMEM95Q3KNT9 176 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 UTF1Q5T230 341 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 LPCAT4Q643R3 524 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 XAF1Q6GPH4 301 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 ZNF529Q6P280 563 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 Q6P435 159 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 SAXO1Q8IYX7 474 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 PARP16Q8N5Y8 322 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 C11orf44Q8N8P7 122 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 MALSU1Q96EH3 234 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 JAM3Q9BX67 310 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 CDCA4Q9BXL8 241 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 CLEC7AQ9BXN2 247 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 PPIL3Q9H2H8 161 aaKnown RBP9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 ZCCHC4Q9H5U6 513 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 INPP5EQ9NRR6 644 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 MRPS18AQ9NVS2 196 aaKnown RBP9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 GSTK1Q9Y2Q3 226 aa9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 UBE2J1Q9Y385 318 aaPredicted RBP9.02□□□□□ -0.97
RAB11FIP3-210ENST00000487899 COL7A1Q02388 2944 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 LOC100130705A0A1B0GUX0 176 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 F2RL2O00254 374 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 SLC33A1O00400 549 aaPredicted RBP9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 GABRPO00591 440 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 MPZL2O60487 215 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 ALX3O95076 343 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 FADS2O95864 444 aaKnown RBP9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 CSF1P09603 554 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 VSIG10L2P0DP72 767 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 GLIPR1P48060 266 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 DYNC1I2Q13409 638 aaKnown RBP9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 ATXN7L3Q14CW9 347 aaPredicted RBP9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 KISS1Q15726 138 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 MINOS1Q5TGZ0 78 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 HEPN1Q6WQI6 88 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 Q6ZS46 218 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 Q6ZTK2 550 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 TRAPPC6BQ86SZ2 158 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 C1QL4Q86Z23 238 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 OR51A2Q8NGJ7 313 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 FAM110DQ8TAY7 271 aaPredicted RBP9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 NKX3-1Q99801 234 aaPredicted RBP9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 ZNF286AQ9HBT8 521 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 FAM118AQ9NWS6 357 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 HILPDAQ9Y5L2 63 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 MINOS1-NBL1R4GNA1 71 aa9.01□□□□□ -0.97
RAB11FIP3-210ENST00000487899 A0A0G2JK05 382 aa9□□□□□ -0.97
RAB11FIP3-210ENST00000487899 ODAMA1E959 279 aa9□□□□□ -0.97
RAB11FIP3-210ENST00000487899 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
RAB11FIP3-210ENST00000487899 FAM90A22PA8MWA6 464 aa9□□□□□ -0.97
RAB11FIP3-210ENST00000487899 SH2D1BO14796 132 aa9□□□□□ -0.97
RAB11FIP3-210ENST00000487899 HCKP08631 526 aa9□□□□□ -0.97
RAB11FIP3-210ENST00000487899 CCDC159P0C7I6 412 aa9□□□□□ -0.97
RAB11FIP3-210ENST00000487899 OCM2P0CE71 109 aa9□□□□□ -0.97
RAB11FIP3-210ENST00000487899 OCMP0CE72 109 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms