RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 AQP7P3A6NL99 342 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 A8MXE2 369 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 DNPH1O43598 174 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 CRTAPO75718 401 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ATG12O94817 140 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 PMP2P02689 132 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 GNB3P16520 340 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 MSR1P21757 451 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 RBMXP38159 391 aaKnown RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 SLC6A9P48067 706 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 CSNK1A1P48729 337 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 CLDN15P56746 228 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF121P58317 390 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 CSNK2A1P68400 391 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 STK11Q15831 433 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 CHRFAM7AQ494W8 412 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 OR10K2Q6IF99 312 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 VWA1Q6PCB0 445 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 CFAP77Q6ZQR2 320 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 PAQR4Q8N4S7 273 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 FNDC9Q8TBE3 224 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 OR51E1Q8TCB6 317 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 SPTSSAQ969W0 71 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 DNAJA3Q96EY1 480 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF845Q96IR2 970 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ARL5BQ96KC2 179 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 C2orf50Q96LR7 162 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 AQP10Q96PS8 301 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 FOXC2Q99958 501 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 METTL8Q9H825 291 aaKnown RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ZMAT3Q9HA38 289 aaKnown RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 GPR84Q9NQS5 396 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF391Q9UJN7 358 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 LHFPL6Q9Y693 200 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF469Q96JG9 3925 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 NIPBLQ6KC79 2804 aaeCLIP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 PIGBOS1A0A0B4J2F0 54 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 MFNGO00587 321 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 CCSO14618 274 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 MSTNO14793 375 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 TRAF3IP2O43734 574 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 RIPPLY3P57055 190 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 ATXN7L3Q14CW9 347 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 CNN3Q15417 329 aaKnown RBP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 HMGN3Q15651 99 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 MICBQ29980 383 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 C10orf128Q5T292 105 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 HAGHLQ6PII5 290 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 C17orf107Q6ZR85 190 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 CSNK2A3Q8NEV1 391 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 BPIFCQ8NFQ6 507 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 OR5AP2Q8NGF4 316 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 OR8B12Q8NGG6 310 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 OR51T1Q8NGJ9 327 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 MARCH1Q8TCQ1 289 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 STARD4Q96DR4 205 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 POM121Q96HA1 1249 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 SEC22AQ96IW7 307 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 OR5B2Q96R09 309 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 KLHDC3Q9BQ90 382 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 PRRG4Q9BZD6 226 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 OPN3Q9H1Y3 402 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 BARX1Q9HBU1 254 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF230Q9UIE0 474 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 PURGQ9UJV8 347 aaKnown RBP7.79□□□□□ -1.16
COL12A1-208ENST00000486533 PCDHB10Q9UN67 800 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 KCNK7Q9Y2U2 307 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 PRELID3BQ9Y3B1 194 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF175Q9Y473 711 aa7.79□□□□□ -1.16
COL12A1-208ENST00000486533 LOC100509620A0A075B734 347 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 TMEM218A2RU14 115 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 ATP6V1G2-DDX39BF2Z307 99 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 LGALS8O00214 317 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 SSX5O60225 188 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 DHRS3O75911 302 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 OPN1LWP04000 364 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 FCGR2AP12318 317 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 PGAM2P15259 253 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF17P17021 662 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 IL11P20809 199 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 KIR2DL2P43627 348 aaPredicted RBP7.78□□□□□ -1.16
COL12A1-208ENST00000486533 FAM27E3Q08E93 113 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 SCRN3Q0VDG4 424 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 HIST3H3Q16695 136 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 PDSS1Q5T2R2 415 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 OR52W1Q6IF63 320 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 FAM57BQ71RH2 274 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 GGNQ86UU5 652 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 LSRQ86X29 649 aaPredicted RBP7.78□□□□□ -1.16
COL12A1-208ENST00000486533 SGPP2Q8IWX5 399 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 OR5AS1Q8N127 324 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 FAM89BQ8N5H3 189 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 COMMD1Q8N668 190 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 OR52H1Q8NGJ2 320 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 SPSB1Q96BD6 273 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 FAM71F1Q96KD3 344 aaPredicted RBP7.78□□□□□ -1.16
COL12A1-208ENST00000486533 TECTBQ96PL2 329 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 TM2D1Q9BX74 207 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 CXXC4Q9H2H0 198 aa7.78□□□□□ -1.16
COL12A1-208ENST00000486533 NELFAQ9H3P2 528 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms