RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 CHD3Q12873 2000 aaKnown RBP11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 TRAV38-1A0A0B4J264 116 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 TMEM235A6NFC5 223 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 TMEM178BH3BS89 294 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 WNT9BO14905 357 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 FSTL3O95633 263 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 HAND1O96004 215 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 HPXP02790 462 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 DUSP1P28562 367 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 PRDX2P32119 198 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 KCNJ3P48549 501 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 GMFBP60983 142 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 DGCR2P98153 550 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 KCNJ8Q15842 424 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 Q6P435 159 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 C6orf201Q7Z4U5 140 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 PEG10Q86TG7 708 aaKnown RBP11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 BOLLQ8N9W6 283 aaKnown RBP11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 SETD6Q8TBK2 473 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 CCL17Q92583 94 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 YIPF5Q969M3 257 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 OCSTAMPQ9BR26 566 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 FAAP24Q9BTP7 215 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 TREM2Q9NZC2 230 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 OR14J1Q9UGF5 321 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 ZNF107Q9UII5 783 aaPredicted RBP11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 KCNK7Q9Y2U2 307 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 RBMX2Q9Y388 322 aaKnown RBP11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 CACNA1DQ01668 2161 aa11.15□□□□□ -0.62
VTI1BP1-201ENST00000486325 DYSFO75923 2080 aa11.15□□□□□ -0.63
VTI1BP1-201ENST00000486325 PPIAL4EA0A075B759 164 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 OOEPA6NGQ2 149 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 RFPL4AA6NLU0 287 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 OR2AT4A6NND4 320 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 PPIAL4DF5H284 164 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 RFPL4AL1F8VTS6 287 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 H7C1Q1 480 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 LGALS8O00214 317 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 NDUFA2O43678 99 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 ORC5O43913 435 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 OR2H2O95918 312 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 CYB5R3P00387 301 aaPredicted RBP11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 CSF1P09603 554 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 PPIAL4FP0DN26 164 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 PSG2P11465 335 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 SSTR2P30874 369 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 MDH2P40926 338 aaKnown RBP11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 SHEQ5VZ18 495 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 TEX36Q5VZQ5 186 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 ZNF57Q68EA5 555 aaPredicted RBP11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 LYSMD2Q8IV50 215 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 TOMM5Q8N4H5 51 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 SUMF2Q8NBJ7 301 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 NEK7Q8TDX7 302 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 CMSS1Q9BQ75 279 aaKnown RBP11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 C7orf50Q9BRJ6 194 aaKnown RBP11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 DPCDQ9BVM2 203 aaPredicted RBP11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 CHST6Q9GZX3 395 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 DNTTIP1Q9H147 329 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 KLK11Q9UBX7 282 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 EDARQ9UNE0 448 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 PPIAL4AQ9Y536 164 aa11.14□□□□□ -0.63
VTI1BP1-201ENST00000486325 DSCAMO60469 2012 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 TRAV24A0A0B4J272 114 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 A0A1W2PQ09 198 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 MEIOCA2RUB1 952 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 CENPXA8MT69 81 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 OVOL3O00110 214 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 F12P00748 615 aaPredicted RBP11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 PTHLHP12272 177 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 EGR1P18146 543 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 DTYMKP23919 212 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 RCVRNP35243 200 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 GDNFP39905 211 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 TMEM33P57088 247 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 DYRK1AQ13627 763 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 PDCD1Q15116 288 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 PAN3Q58A45 887 aaKnown RBP11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 ATPAF1Q5TC12 328 aaPredicted RBP11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 STEAP3Q658P3 488 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 TRAPPC6BQ86SZ2 158 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 OR5D13Q8NGL4 314 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 MED30Q96HR3 178 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 COX4I2Q96KJ9 171 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 SULT4A1Q9BR01 284 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 MYOZ1Q9NP98 299 aaPredicted RBP11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 IFT46Q9NQC8 304 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 IL36RNQ9UBH0 155 aa11.13□□□□□ -0.63
VTI1BP1-201ENST00000486325 UBE2QL1A1L167 161 aa11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 SIRPB1O00241 398 aa11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 SLC33A1O00400 549 aaPredicted RBP11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 DAOP14920 347 aa11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 COL8A2P25067 703 aa11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 GABRA2P47869 451 aa11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 EFNA4P52798 201 aa11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 IFITM3Q01628 133 aa11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 SRSF7Q16629 238 aaKnown RBP eCLIP11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 RNASE12Q5GAN4 147 aaKnown RBP11.12□□□□□ -0.63
VTI1BP1-201ENST00000486325 SFRP4Q6FHJ7 346 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms