RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 WASF3Q9UPY6 502 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 FAM215AQ9Y5M1 114 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 SHANK1Q9Y566 2161 aa10.21□□□□□ -0.77
PKP4-213ENST00000486254 TRAV14DV4A0A0A6YYC5 116 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.21□□□□□ -0.78
PKP4-213ENST00000486254 CRYM-AS1A6NIL9 109 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 H7C1Q1 480 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 SDCBPO00560 298 aaPredicted RBP10.21□□□□□ -0.78
PKP4-213ENST00000486254 SPIN3Q5JUX0 258 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 TIMM23BQ5SRD1 257 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 C11orf87Q6NUJ2 197 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 GSG1LQ6UXU4 331 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 MOB1BQ7L9L4 216 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 FAM185AQ8N0U4 392 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 FAM58AQ8N1B3 248 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 OR8H1Q8NGG4 311 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 SLC25A40Q8TBP6 338 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 OR2J1Q9GZK6 312 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 TLNRD1Q9H1K6 362 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 Q9N2K0 584 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 ZNF629Q9UEG4 869 aaPredicted RBP10.21□□□□□ -0.78
PKP4-213ENST00000486254 MAB21L2Q9Y586 359 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 SLC25A15Q9Y619 301 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 ACACAQ13085 2346 aa10.21□□□□□ -0.78
PKP4-213ENST00000486254 CUL9Q8IWT3 2517 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 SVILO95425 2214 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 C1QTNF9BB2RNN3 333 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 SYNGR1O43759 233 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 LILRA1O75019 489 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 MPC2O95563 127 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 IFNA2P01563 188 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 CECR9P0C854 216 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 PGA5P0DJD9 388 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 CA6P23280 308 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 MZT1Q08AG7 82 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 ZNF880Q6PDB4 577 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 CXorf67Q86X51 503 aaPredicted RBP10.2□□□□□ -0.78
PKP4-213ENST00000486254 SGPP2Q8IWX5 399 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 SPACA3Q8IXA5 215 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 SLC38A6Q8IZM9 456 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 GAPTQ8N292 157 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 LRTM2Q8N967 370 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 ZNF610Q8N9Z0 462 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 BHLHE23Q8NDY6 225 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 OR8G5Q8NG78 346 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 OR1J1Q8NGS3 322 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 KLF14Q8TD94 323 aaPredicted RBP10.2□□□□□ -0.78
PKP4-213ENST00000486254 MAFIPQ8WZ33 124 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 NRIP2Q9BQI9 281 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 ADAT1Q9BUB4 502 aaKnown RBP10.2□□□□□ -0.78
PKP4-213ENST00000486254 PDCD10Q9BUL8 212 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 C1orf123Q9NWV4 160 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 ZNF581Q9P0T4 197 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 TNFSF18Q9UNG2 199 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 MSRB2Q9Y3D2 182 aa10.2□□□□□ -0.78
PKP4-213ENST00000486254 FXYD6-FXYD2A0A087WZ82 144 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 NPIPB11E5RHQ5 1161 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 K7ENP7 123 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 ARPC5O15511 151 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 RP2O75695 350 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 B3GALNT1O75752 331 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 ZNF728P0DKX0 622 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 LYL1P12980 280 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 PGAM2P15259 253 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 OPRM1P35372 400 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 HTR2BP41595 481 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 SORDQ00796 357 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 PSG7Q13046 419 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 ZNF146Q15072 292 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 CLLU1Q5K131 121 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 SLC22A25Q6T423 547 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 TMUB2Q71RG4 321 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 CASTOR1Q8WTX7 329 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 PPP1R1CQ8WVI7 109 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 CYYR1Q96J86 154 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 SUCNR1Q9BXA5 334 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 FXYD6Q9H0Q3 95 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 PIGMQ9H3S5 423 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 HES4Q9HCC6 221 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 UBQLN2Q9UHD9 624 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 PURGQ9UJV8 347 aaKnown RBP10.19□□□□□ -0.78
PKP4-213ENST00000486254 AUP1Q9Y679 476 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 ATP23Q9Y6H3 246 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 ESPL1Q14674 2120 aa10.19□□□□□ -0.78
PKP4-213ENST00000486254 IGHV2OR16-5A0A0B4J2B6 119 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 PIGBOS1A0A0B4J2F0 54 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 LINC00862A6NCI5 91 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 F8VVB4 439 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 F8VWA3 439 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 PET100P0DJ07 73 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 PRKACAP17612 351 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 RBMXP38159 391 aaKnown RBP10.18□□□□□ -0.78
PKP4-213ENST00000486254 TDGF1P3P51864 188 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 RND3P61587 244 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 ZNF718Q3SXZ3 478 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 FIP1L1Q6UN15 594 aaKnown RBP10.18□□□□□ -0.78
PKP4-213ENST00000486254 Q6ZPA2 131 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 WDR86Q86TI4 376 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 SLC51BQ86UW2 128 aa10.18□□□□□ -0.78
PKP4-213ENST00000486254 SLC7A5P1Q8MH63 180 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms