RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 NPDC1Q9NQX5 325 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-228ENST00000486227 ZNF391Q9UJN7 358 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 MMP24Q9Y5R2 645 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 PQLC2LA1A4F0 135 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 SEC14L6B5MCN3 397 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 CCL21O00585 134 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 RAB5AP20339 215 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 TAS2R30P59541 319 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 HBG1P69891 147 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 HBG2P69892 147 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 TGIF1Q15583 401 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 ALKBH6Q3KRA9 238 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 OR2B11Q5JQS5 317 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 KHDC1LQ5JSQ8 128 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 ZNF468Q5VIY5 522 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-228ENST00000486227 CXorf67Q86X51 503 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-228ENST00000486227 OR4A16Q8NH70 328 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 UBALD1Q8TB05 177 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 PIK3IP1Q96FE7 263 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 AMELYQ99218 206 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 FAAP24Q9BTP7 215 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 CABLES2Q9BTV7 478 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 IGKV1D-42A0A075B6H8 117 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 IGHV1-45A0A0A0MS14 117 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 ZFP92A6NM28 416 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 A8MXE2 369 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 H7BYZ3 331 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 MFNGO00587 321 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 CNIH1O95406 144 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 CEACAM1P13688 526 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 MMP16P51512 607 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 NAAAQ02083 359 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 RAB32Q13637 225 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 GGTLC2Q14390 218 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 Q3ZCU0 254 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 TMEM268Q5VZI3 342 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 TMEM105Q8N8V8 129 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 OR2M7Q8NG81 312 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 SOSTQ9BQB4 213 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 SLC39A9Q9NUM3 307 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 SHISA3A0PJX4 238 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 PRDX4Q13162 271 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 MOGAT2Q3SYC2 334 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 SLC25A42Q86VD7 318 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 ZDHHC16Q969W1 377 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 GPX7Q96SL4 187 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-228ENST00000486227 ADAT1Q9BUB4 502 aaKnown RBP9.69□□□□□ -0.86
HDAC6-228ENST00000486227 NMES1Q9C002 83 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 PLK3Q9H4B4 646 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 AKIRIN1Q9H9L7 192 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-228ENST00000486227 CACNA1HO95180 2353 aa9.69□□□□□ -0.86
HDAC6-228ENST00000486227 A0A1W2PPV4 95 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 C7orf77A4D0Y5 90 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 CDC14BO60729 498 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 SCAF4O95104 1147 aaKnown RBP9.68□□□□□ -0.86
HDAC6-228ENST00000486227 PDLIM3Q53GG5 364 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-228ENST00000486227 ADPRHL1Q8NDY3 354 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 NRIP2Q9BQI9 281 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 RSRP1Q9BUV0 290 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
HDAC6-228ENST00000486227 KCNMB2Q9Y691 235 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 MGAMO43451 1857 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 A0A0U1RQK1 487 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 TERTO14746 1132 aaKnown RBP9.68□□□□□ -0.86
HDAC6-228ENST00000486227 SIGLEC5O15389 551 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 ZP1P60852 638 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 OR2Z1Q8NG97 314 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 OR13G1Q8NGZ3 307 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 HPSE2Q8WWQ2 592 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 TECTBQ96PL2 329 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 CHRNA10Q9GZZ6 450 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 MRPS18BQ9Y676 258 aaKnown RBP9.68□□□□□ -0.86
HDAC6-228ENST00000486227 KIR3DL2P43630 455 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 RSPO4Q2I0M5 234 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-228ENST00000486227 RPL7L1Q6DKI1 246 aaKnown RBP9.68□□□□□ -0.86
HDAC6-228ENST00000486227 SLC36A1Q7Z2H8 476 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 LDLRAD3Q86YD5 345 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 OR10X1Q8NGY0 326 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 GPX8Q8TED1 209 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 TMEM18Q96B42 140 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 PGLYRP3Q96LB9 341 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 OR51M1Q9H341 326 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 ZP4Q12836 540 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 C4orf17Q53FE4 359 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 NCMAPQ5T1S8 102 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 FLVCR1-AS1Q8TAF5 88 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 MITD1Q8WV92 249 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 CHST6Q9GZX3 395 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 GCM1Q9NP62 436 aa9.68□□□□□ -0.86
HDAC6-228ENST00000486227 HEYLQ9NQ87 328 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-228ENST00000486227 FABP4P15090 132 aa9.67□□□□□ -0.86
HDAC6-228ENST00000486227 SP6Q3SY56 376 aa9.67□□□□□ -0.86
HDAC6-228ENST00000486227 ZCCHC14Q8WYQ9 949 aaKnown RBP9.67□□□□□ -0.86
HDAC6-228ENST00000486227 ISOC2Q96AB3 205 aa9.67□□□□□ -0.86
HDAC6-228ENST00000486227 RIMS4Q9H426 269 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-228ENST00000486227 PATZ1Q9HBE1 687 aaKnown RBP9.67□□□□□ -0.86
HDAC6-228ENST00000486227 RNF150Q9ULK6 438 aa9.67□□□□□ -0.86
HDAC6-228ENST00000486227 FZR1Q9UM11 496 aa9.67□□□□□ -0.86
HDAC6-228ENST00000486227 NPTNQ9Y639 398 aa9.67□□□□□ -0.86
HDAC6-228ENST00000486227 FNDC1Q4ZHG4 1894 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms