RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 MZT2BQ6NZ67 158 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 CCBE1Q6UXH8 406 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-207ENST00000486080 MEX3BQ6ZN04 569 aaKnown RBP12.15□□□□□ -0.46
COL9A1-207ENST00000486080 BPIFB2Q8N4F0 458 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 OR4D10Q8NGI6 311 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 MAFIPQ8WZ33 124 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 DIRC2Q96SL1 478 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 RCC2Q9P258 522 aaKnown RBP12.15□□□□□ -0.46
COL9A1-207ENST00000486080 OR14J1Q9UGF5 321 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 hCG_2014768A0A024R1R8 64 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 PRSS44E7EML9 344 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 DEGS1O15121 323 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 TPD52L2O43399 206 aaKnown RBP12.14□□□□□ -0.47
COL9A1-207ENST00000486080 AP3S2P59780 193 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 ARL6IP1Q15041 203 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 ZNF146Q15072 292 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 LINC00596Q86U02 117 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 GCSAMQ8N6F7 178 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 SUMF2Q8NBJ7 301 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 OR10Z1Q8NGY1 313 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 RDH5Q92781 318 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 OCSTAMPQ9BR26 566 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 ST6GALNAC5Q9BVH7 336 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 IFT46Q9NQC8 304 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 DCAF16Q9NXF7 216 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 HELZ2Q9BYK8 2649 aaKnown RBP12.14□□□□□ -0.47
COL9A1-207ENST00000486080 COL12A1Q99715 3063 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 SRRM5B3KS81 715 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 M0QYG6 137 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 SIRPB1O00241 398 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 CA11O75493 328 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 OR2H2O95918 312 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 LHBP01229 141 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 ZNF44P15621 663 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 RCVRNP35243 200 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 CFHR2P36980 270 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 FAM201AQ5SY85 155 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 TMEM229BQ8NBD8 167 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 MINDY2Q8NBR6 621 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 OR5T2Q8NGG2 359 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 OR4C16Q8NGL9 310 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 ENKURQ8TC29 256 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 SNAPC3Q92966 411 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 CMSS1Q9BQ75 279 aaKnown RBP12.14□□□□□ -0.47
COL9A1-207ENST00000486080 MMP28Q9H239 520 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 TAS2R8Q9NYW2 309 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 NLKQ9UBE8 527 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 ANAPC10Q9UM13 185 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 PPP1R3CQ9UQK1 317 aa12.14□□□□□ -0.47
COL9A1-207ENST00000486080 GCN1Q92616 2671 aaKnown RBP12.13□□□□□ -0.47
COL9A1-207ENST00000486080 IGHV3OR15-7A0A075B7D8 119 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 FAM240BA0A1B0GVZ2 78 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 CENPXA8MT69 81 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 ZNF205O95201 554 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 CYB5R3P00387 301 aaPredicted RBP12.13□□□□□ -0.47
COL9A1-207ENST00000486080 GIFP27352 417 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 SLC6A1P30531 599 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 CCR6P51684 374 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 SMIM21Q3B7S5 101 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 SPIN3Q5JUX0 258 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 FAM209AQ5JX71 171 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 Q8TCH9 128 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 C7orf50Q9BRJ6 194 aaKnown RBP12.13□□□□□ -0.47
COL9A1-207ENST00000486080 DPCDQ9BVM2 203 aaPredicted RBP12.13□□□□□ -0.47
COL9A1-207ENST00000486080 MS4A5Q9H3V2 200 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 SAP30LQ9HAJ7 183 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 DECR2Q9NUI1 292 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 ZNF701Q9NV72 531 aaPredicted RBP12.13□□□□□ -0.47
COL9A1-207ENST00000486080 MCUBQ9NWR8 336 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 RNF7Q9UBF6 113 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 DCHS2Q6V1P9 2916 aa12.13□□□□□ -0.47
COL9A1-207ENST00000486080 LRRK2Q5S007 2527 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 DSCAMO60469 2012 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 RFPL4AA6NLU0 287 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 A6NNC1 897 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 ZNF736B4DX44 427 aaPredicted RBP12.12□□□□□ -0.47
COL9A1-207ENST00000486080 MCRIP1C9JLW8 97 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 RFPL4AL1F8VTS6 287 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 SLC33A1O00400 549 aaPredicted RBP12.12□□□□□ -0.47
COL9A1-207ENST00000486080 SH2D1BO14796 132 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 HAND1O96004 215 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 CD8AP01732 235 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 AKAIN1P0CW23 69 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 TNFRSF1AP19438 455 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 CD80P33681 288 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 TAS2R19P59542 299 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 SNRPD2P62316 118 aaKnown RBP12.12□□□□□ -0.47
COL9A1-207ENST00000486080 TESK1Q15569 626 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 PLA1AQ53H76 456 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 STEAP1BQ6NZ63 245 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 FIP1L1Q6UN15 594 aaKnown RBP12.12□□□□□ -0.47
COL9A1-207ENST00000486080 Q6ZPA2 131 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 TINAGL1Q9GZM7 467 aaPredicted RBP12.12□□□□□ -0.47
COL9A1-207ENST00000486080 EGLN1Q9GZT9 426 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 RASL12Q9NYN1 266 aa12.12□□□□□ -0.47
COL9A1-207ENST00000486080 RAI1Q7Z5J4 1906 aaPredicted RBP12.12□□□□□ -0.47
COL9A1-207ENST00000486080 IGKV1D-8A0A087WSZ0 117 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 KNG1P01042 644 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 SOD3P08294 240 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms