RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 OR51T1Q8NGJ9 327 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 OR6M1Q8NGM8 313 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 ST8SIA4Q92187 359 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 H1FXQ92522 213 aaKnown RBP4.7□□□□□ -1.66
COPS3-208ENST00000486032 C12orf43Q96C57 262 aaKnown RBP4.7□□□□□ -1.66
COPS3-208ENST00000486032 ISOC1Q96CN7 298 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 OR8B2Q96RD0 313 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SMR3AQ99954 134 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 NRIP2Q9BQI9 281 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 UQCC2Q9BRT2 126 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 REG4Q9BYZ8 158 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SELENOIQ9C0D9 397 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 CHST6Q9GZX3 395 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 DCSTAMPQ9H295 470 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 TMEM165Q9HC07 324 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 STEAP1Q9UHE8 339 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 GLS2Q9UI32 602 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 ST3GAL6Q9Y274 331 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 CEPT1Q9Y6K0 416 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 U3KQE9 123 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 ITPR3Q14573 2671 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 A0A0G2JK05 382 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 TMEM272A0A1B0GTI8 110 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 MEX3AA1L020 520 aaKnown RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 IFITM5A6NNB3 132 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 POM121CA8CG34 1229 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 VWC2LB2RUY7 222 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 SH2D1BO14796 132 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 DEGS1O15121 323 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 SLC22A1O15245 554 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 PHF1O43189 567 aaPredicted RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 NOS1APO75052 506 aaPredicted RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 ZNF780AO75290 641 aaPredicted RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 OR7C1O76099 320 aaPredicted RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 BPNT1O95861 308 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 HAND1O96004 215 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 LHBP01229 141 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 IL1AP01583 271 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 HEXAP06865 529 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 GTF2F2P13984 249 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 MUC1P15941 1255 aaPredicted RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 MGMTP16455 207 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 GIFP27352 417 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 IL2RGP31785 369 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 PRDX2P32119 198 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 CFHR2P36980 270 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 TMBIM6P55061 237 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 FGF12P61328 243 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 SEC61A1P61619 476 aaKnown RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 GNB2P62879 340 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 LCN2P80188 198 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 COL10A1Q03692 680 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 PLA2G7Q13093 441 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 MADCAM1Q13477 382 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 GPR176Q14439 515 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 EDDM3AQ14507 147 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 KCNJ8Q15842 424 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 TAF9Q16594 264 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 CTF1Q16619 201 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 C2orf76Q3KRA6 126 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 TEX36Q5VZQ5 186 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 STUMQ69YW2 141 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 PRSS57Q6UWY2 283 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 DCDC5Q6ZRR9 648 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 NLRC3Q7RTR2 1065 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 SLC36A1Q7Z2H8 476 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 LRRC28Q86X40 367 aaPredicted RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 Q8IYB0 196 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 SAXO1Q8IYX7 474 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 CD177Q8N6Q3 437 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 DTX3Q8N9I9 347 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 CHST4Q8NCG5 386 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 ZNRF1Q8ND25 227 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 TBC1D15Q8TC07 691 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 LGALS14Q8TCE9 139 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 NEK7Q8TDX7 302 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 RAB2BQ8WUD1 216 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 SLC25A28Q96A46 364 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 FAM3DQ96BQ1 224 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 NEIL1Q96FI4 390 aaPredicted RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 GAFA1Q96PS6 74 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 DCUN1D5Q9BTE7 237 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 TMEM59Q9BXS4 323 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 CST11Q9H112 138 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 GSX1Q9H4S2 264 aaPredicted RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 ZNF665Q9H7R5 613 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 LIN7BQ9HAP6 207 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 PATZ1Q9HBE1 687 aaKnown RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 HMG20AQ9NP66 347 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 PCDHB16Q9NRJ7 776 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 RASL12Q9NYN1 266 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 ZNF581Q9P0T4 197 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 COMMD3Q9UBI1 195 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 CTSZQ9UBR2 303 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 RSL24D1Q9UHA3 163 aaKnown RBP4.69□□□□□ -1.66
COPS3-208ENST00000486032 F8P00451 2351 aa4.69□□□□□ -1.66
COPS3-208ENST00000486032 A0A075B6Q4 140 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 IGKV1D-17A0A075B6S4 117 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 UBE2QL1A1L167 161 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms