RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 URM1Q9BTM9 101 aaKnown RBP14.24□□□□□ -0.13
VIM-205ENST00000485947 TMEM59Q9BXS4 323 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 TLNRD1Q9H1K6 362 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 KCNK15Q9H427 330 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 ELL3Q9HB65 397 aaPredicted RBP14.24□□□□□ -0.13
VIM-205ENST00000485947 DIABLOQ9NR28 239 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 PCDHB10Q9UN67 800 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 V9GYH0 126 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 ISPDA4D126 451 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 F5H5P2 479 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 TMEM178BH3BS89 294 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 ANGPTL7O43827 346 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 CRTAPO75718 401 aaPredicted RBP14.23□□□□□ -0.13
VIM-205ENST00000485947 ACAA1P09110 424 aaPredicted RBP14.23□□□□□ -0.13
VIM-205ENST00000485947 PPP5CP53041 499 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 ZNF154Q13106 437 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 SLC22A6Q4U2R8 563 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 RAB12Q6IQ22 244 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 FAHD2BQ6P2I3 314 aaPredicted RBP14.23□□□□□ -0.13
VIM-205ENST00000485947 HAGHLQ6PII5 290 aaPredicted RBP14.23□□□□□ -0.13
VIM-205ENST00000485947 WDR86Q86TI4 376 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 Q8NFD4 153 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 C15orf40Q8WUR7 153 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 ZFAND2BQ8WV99 257 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 AQP3Q92482 292 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 BORCS5Q969J3 196 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 FAHD2AQ96GK7 314 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 MEGF10Q96KG7 1140 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 NUDT16L1Q9BRJ7 211 aaKnown RBP14.23□□□□□ -0.13
VIM-205ENST00000485947 PATZ1Q9HBE1 687 aaKnown RBP14.23□□□□□ -0.13
VIM-205ENST00000485947 LPAR2Q9HBW0 351 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 ANK2Q01484 3957 aa14.23□□□□□ -0.13
VIM-205ENST00000485947 IGKV1-12A0A0C4DH73 117 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 TRAPPC2LH3BP13 241 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 MPIG6BO95866 241 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 PLATP00750 562 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 IGKV1D-12P01611 117 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 CHRM2P08172 466 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 GTF2F2P13984 249 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 MGMTP16455 207 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 SERPINA2P20848 420 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 PITPNBP48739 271 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 EFNB2P52799 333 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 RPS27AP62979 156 aaKnown RBP14.22□□□□□ -0.13
VIM-205ENST00000485947 PITPNAQ00169 270 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 PLA2G7Q13093 441 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 MAB21L1Q13394 359 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 IL18Q14116 193 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 DCAF12L2Q5VW00 463 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 ELP2Q6IA86 826 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 OR10K2Q6IF99 312 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 PYHIN1Q6K0P9 492 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 Q8IYB0 196 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 SCCPDHQ8NBX0 429 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 Q8TCH9 128 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 TM2D1Q9BX74 207 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 ATG5Q9H1Y0 275 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 TANC2Q9HCD6 1990 aa14.22□□□□□ -0.13
VIM-205ENST00000485947 A8MXK9 166 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 XRCC3O43542 346 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 HTR3BO95264 441 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 ZNF79Q15937 498 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 SPRNQ5BIV9 151 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 TMEM69Q5SWH9 247 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 OSR2Q8N2R0 312 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 GDPD1Q8N9F7 314 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 TMEM104Q8NE00 496 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 OR56B1Q8NGI3 324 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 OR10K1Q8NGX5 313 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 CCDC32Q9BV29 185 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 LPAR5Q9H1C0 372 aa14.21□□□□□ -0.13
VIM-205ENST00000485947 AKR7A2O43488 359 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 SYNGR1O43759 233 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 NOS1APO75052 506 aaPredicted RBP14.2□□□□□ -0.14
VIM-205ENST00000485947 GRPP07492 148 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 CDK2P24941 298 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 FGF12P61328 243 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 MRPS10P82664 201 aaKnown RBP14.2□□□□□ -0.14
VIM-205ENST00000485947 ZMYND11Q15326 602 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 KRTAP24-1Q3LI83 254 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 NHLRC3Q5JS37 347 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 OR10Z1Q8NGY1 313 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 NANPQ8TBE9 248 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 ZNF418Q8TF45 676 aaPredicted RBP14.2□□□□□ -0.14
VIM-205ENST00000485947 SLAMF9Q96A28 289 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 Q96M66 194 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 TMPRSS13Q9BYE2 586 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 SRRQ9GZT4 340 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 BANF2Q9H503 90 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 PALMDQ9NP74 551 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 MTCH1Q9NZJ7 389 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 MIOXQ9UGB7 285 aa14.2□□□□□ -0.14
VIM-205ENST00000485947 A0A1W2PP11 408 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A10PA6NDY2 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A18PA6NE21 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A16PA6NEW6 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A20PA6NIJ5 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A8PA6NJQ4 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 FAM90A7PA6NKC0 464 aa14.19□□□□□ -0.14
VIM-205ENST00000485947 A6NLC8 198 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms