RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 FAM90A24PP0C7X0 464 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 ZNF44P15621 663 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 ARSBP15848 533 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 RAB3BP20337 219 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 IL2RGP31785 369 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 SRP14P37108 136 aaKnown RBP6.88□□□□□ -1.31
SF3A1-208ENST00000485618 OR3A4PP47883 348 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 NPBWR2P48146 333 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 ZP1P60852 638 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 MEF2CQ06413 473 aaPredicted RBP6.88□□□□□ -1.31
SF3A1-208ENST00000485618 RBM39Q14498 530 aaKnown RBP6.88□□□□□ -1.31
SF3A1-208ENST00000485618 NHLRC3Q5JS37 347 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 C1orf100Q5SVJ3 147 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 METTL11BQ5VVY1 283 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 LYPD2Q6UXB3 125 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 BTN2A1Q7KYR7 527 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 GPR141Q7Z602 305 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 Q8NFD4 153 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 OR51T1Q8NGJ9 327 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 NANPQ8TBE9 248 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 H1FXQ92522 213 aaKnown RBP6.88□□□□□ -1.31
SF3A1-208ENST00000485618 NUDT16L1Q9BRJ7 211 aaKnown RBP6.88□□□□□ -1.31
SF3A1-208ENST00000485618 CHCHD6Q9BRQ6 235 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 SHARPINQ9H0F6 387 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 RAB9BQ9NP90 201 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 TXNL4BQ9NX01 149 aaKnown RBP6.88□□□□□ -1.31
SF3A1-208ENST00000485618 ST3GAL6Q9Y274 331 aa6.88□□□□□ -1.31
SF3A1-208ENST00000485618 IGHV2-70DA0A0C4DH43 119 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 hADV38S2A0JD32 116 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 METTL21EPA6NDL7 271 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 SLC17A2O00624 439 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 OR7C1O76099 320 aaPredicted RBP6.87□□□□□ -1.31
SF3A1-208ENST00000485618 CDRT1O95170 752 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 GLAP06280 429 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 SFTPBP07988 381 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 PPIAL4GP0DN37 164 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 ZNF16P17020 682 aaPredicted RBP6.87□□□□□ -1.31
SF3A1-208ENST00000485618 SERPINA2P20848 420 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 LMO1P25800 156 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 GP2P55259 537 aaKnown RBP6.87□□□□□ -1.31
SF3A1-208ENST00000485618 BPIFB3P59826 476 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 RPL31P62899 125 aaKnown RBP6.87□□□□□ -1.31
SF3A1-208ENST00000485618 COL10A1Q03692 680 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 INSL4Q14641 139 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 ARL6IP1Q15041 203 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 GRK1Q15835 563 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 CHRFAM7AQ494W8 412 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 PAN3Q58A45 887 aaKnown RBP6.87□□□□□ -1.31
SF3A1-208ENST00000485618 FAM27D1Q5T7N8 215 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 ZNF841Q6ZN19 808 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 C1orf122Q6ZSJ8 110 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 OR2W3Q7Z3T1 314 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 LRRTM1Q86UE6 522 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 OR8H2Q8N162 312 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 CD177Q8N6Q3 437 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 KIR3DL3Q8N743 410 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 FAM216BQ8N7L0 139 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 ZNF565Q8N9K5 539 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 ZNRF1Q8ND25 227 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 PHF21AQ96BD5 680 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 GAFA1Q96PS6 74 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 NEDD4LQ96PU5 975 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 IFT22Q9H7X7 185 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 STEAP1Q9UHE8 339 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 RPUSD1Q9UJJ7 312 aaKnown RBP6.87□□□□□ -1.31
SF3A1-208ENST00000485618 ZNF222Q9UK12 451 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 AK6Q9Y3D8 172 aaKnown RBP6.87□□□□□ -1.31
SF3A1-208ENST00000485618 AUP1Q9Y679 476 aa6.87□□□□□ -1.31
SF3A1-208ENST00000485618 SONP18583 2426 aaKnown RBP6.86□□□□□ -1.31
SF3A1-208ENST00000485618 TRGV10A0A0A0MS01 117 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 IGKV1-12A0A0C4DH73 117 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 A0A0G2JK05 382 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 NOTOA8MTQ0 251 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 MCRIP1C9JLW8 97 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 F8VVB4 439 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 F8VWA3 439 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 AIPO00170 330 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 SLC22A1O15245 554 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 CA11O75493 328 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 SCGNO76038 276 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 IGKV1D-12P01611 117 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 CD37P11049 281 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 MGMTP16455 207 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 FUT3P21217 361 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 GADD45AP24522 165 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 FPR2P25090 351 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 ZFP36P26651 326 aaKnown RBP6.86□□□□□ -1.31
SF3A1-208ENST00000485618 DUSP1P28562 367 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 ERP29P30040 261 aaKnown RBP6.86□□□□□ -1.31
SF3A1-208ENST00000485618 RPL5P46777 297 aaKnown RBP6.86□□□□□ -1.31
SF3A1-208ENST00000485618 SNU13P55769 128 aaKnown RBP6.86□□□□□ -1.31
SF3A1-208ENST00000485618 EDDM3BP56851 147 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 RBM11P57052 281 aaKnown RBP6.86□□□□□ -1.31
SF3A1-208ENST00000485618 PDCD1Q15116 288 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 CR1LQ2VPA4 569 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 ATAD3CQ5T2N8 411 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 NCR3LG1Q68D85 454 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 ASPHD2Q6ICH7 369 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 C1QL2Q7Z5L3 287 aa6.86□□□□□ -1.31
SF3A1-208ENST00000485618 BATF2Q8N1L9 274 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms