RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 FOXB2Q5VYV0 432 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 RNF144BQ7Z419 303 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 WFDC9Q8NEX5 89 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 OR8J1Q8NGP2 316 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 OR2G2Q8NGZ5 317 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 HMG20AQ9NP66 347 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 DPM3Q9P2X0 92 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 GLS2Q9UI32 602 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 ZNF281Q9Y2X9 895 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 IGKV1-12A0A0C4DH73 117 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 OR2H2O95918 312 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 IGKV1D-12P01611 117 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 CD33P20138 364 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 PRKACBP22694 351 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 CDK2P24941 298 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 PDZK1IP1Q13113 114 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 TMED1Q13445 227 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 IL18R1Q13478 541 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 TCTEX1D4Q5JR98 221 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 SPIN3Q5JUX0 258 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 TMEM244Q5VVB8 128 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 UTS2BQ765I0 119 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 STMN2Q93045 179 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 GABARAPL3Q9BY60 117 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 EXOSC4Q9NPD3 245 aaKnown RBP15.38■□□□□ 0.05
COL27A1-205ENST00000485397 FRRS1LQ9P0K9 344 aa15.38■□□□□ 0.05
COL27A1-205ENST00000485397 SH2D7A6NKC9 451 aaPredicted RBP15.37■□□□□ 0.05
COL27A1-205ENST00000485397 H3BUI4 141 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 ZNF20P17024 532 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 GLIPR1P48060 266 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 NANOS3P60323 173 aaKnown RBP15.37■□□□□ 0.05
COL27A1-205ENST00000485397 BDH1Q02338 343 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 AESQ08117 197 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 CCDC121Q6ZUS5 278 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 LHFPL2Q6ZUX7 228 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 CENPVQ7Z7K6 275 aaPredicted RBP15.37■□□□□ 0.05
COL27A1-205ENST00000485397 OR10AC1Q8NH08 325 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 OPALINQ96PE5 141 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 SPACA5Q96QH8 159 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 KIAA2026Q5HYC2 2103 aa15.37■□□□□ 0.05
COL27A1-205ENST00000485397 TRGV10A0A0A0MS01 117 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 TCRBV4S1A1TA0A5B7 111 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 SH2D1BO14796 132 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 LPLP06858 475 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 PF4V1P10720 104 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 BRS3P32247 399 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 CDC42P60953 191 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 BNIP1Q12981 228 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 ABCA11PQ4W5N1 156 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 OR52W1Q6IF63 320 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 HEPN1Q6WQI6 88 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 C16orf82Q7Z2V1 217 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 RTN4RL2Q86UN3 420 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 OR5D18Q8NGL1 313 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 ZNF596Q8TC21 504 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 CORO2AQ92828 525 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 RFKQ969G6 155 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 SPSB1Q96BD6 273 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 MBOAT4Q96T53 435 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 SLC25A33Q9BSK2 321 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 GAL3ST2Q9H3Q3 398 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 LIN7BQ9HAP6 207 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 ZNF286AQ9HBT8 521 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 ING3Q9NXR8 418 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 OAZ3Q9UMX2 235 aa15.36■□□□□ 0.05
COL27A1-205ENST00000485397 SAC3D1A6NKF1 404 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 LEUTXA8MZ59 168 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 KDM4BO94953 1096 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 MPIG6BO95866 241 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 IGLV1-47P01700 117 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 ISG15P05161 165 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 FCGR1AP12314 374 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 LMO1P25800 156 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 SCN1BQ07699 218 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 UTF1Q5T230 341 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 C1orf146Q5VVC0 180 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 C10orf99Q6UWK7 81 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 OR51A4Q8NGJ6 313 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 CAPSLQ8WWF8 208 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 MYDGFQ969H8 173 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 AKR1E2Q96JD6 320 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 OSBPL10Q9BXB5 764 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 COMMD4Q9H0A8 199 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 TAS2R3Q9NYW6 316 aa15.35■□□□□ 0.05
COL27A1-205ENST00000485397 AMY1AP04745 511 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 AMY2AP04746 511 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 OCM2P0CE71 109 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 OCMP0CE72 109 aaPredicted RBP15.34■□□□□ 0.05
COL27A1-205ENST00000485397 ZNF44P15621 663 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 CD34P28906 385 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 KPNB1Q14974 876 aaKnown RBP15.34■□□□□ 0.05
COL27A1-205ENST00000485397 Q6P435 159 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 FDX2Q6P4F2 183 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 OR13C9Q8NGT0 318 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 RNFT2Q96EX2 444 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 CENPNQ96H22 339 aaPredicted RBP15.34■□□□□ 0.05
COL27A1-205ENST00000485397 COQ2Q96H96 371 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 RBM14Q96PK6 669 aaKnown RBP15.34■□□□□ 0.05
COL27A1-205ENST00000485397 HHLA2Q9UM44 414 aa15.34■□□□□ 0.05
COL27A1-205ENST00000485397 TSSC4Q9Y5U2 329 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms