RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TIGD4Q8IY51 512 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 FTMTQ8N4E7 242 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 TPRX1Q8N7U7 411 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 MAPKAPK5-AS1Q8N8E1 139 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 OR4C15Q8NGM1 316 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 OR56B4Q8NH76 319 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 UBLCP1Q8WVY7 318 aaPredicted RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 RASSF5Q8WWW0 418 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 LZICQ8WZA0 190 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 AQP3Q92482 292 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 ITFG2Q969R8 447 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 SNX22Q96L94 193 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 UBE2E2Q96LR5 201 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 HIST1H2AAQ96QV6 131 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 NMNAT3Q96T66 252 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 QTRT1Q9BXR0 403 aaKnown RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 POLR2J2Q9GZM3 115 aaKnown RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 NDEL1Q9GZM8 345 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 POLR2J3Q9H1A7 115 aaKnown RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 OR51I2Q9H344 312 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 NRIP3Q9NQ35 241 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 RPRD1BQ9NQG5 326 aaKnown RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 MRPL22Q9NWU5 206 aaKnown RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 RASL12Q9NYN1 266 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 SIGLEC8Q9NYZ4 499 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 RHCGQ9UBD6 479 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 DNAJB9Q9UBS3 223 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 VSIG4Q9Y279 399 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 TRBV5-3A0A0A0MS03 114 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 hADV38S2A0JD32 116 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A18PA6NE21 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A16PA6NEW6 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 TVP23AA6NH52 213 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A20PA6NIJ5 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A9PA6NNJ1 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 NCBP2LA6PVI3 153 aaKnown RBP4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A12PA8MX19 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A5PA8MXJ8 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 TOR1AO14656 332 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 RRP9O43818 475 aaKnown RBP4.04□□□□□ -1.76
PTPN4-210ENST00000485247 NDUFB2O95178 105 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 CNIH1O95406 144 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 CST4P01036 141 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 IGKV1D-33P01593 117 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 IGKV1-33P01594 117 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 IGLV1-47P01700 117 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 IGLV1-51P01701 117 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 IGF1P05019 195 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A15PP0C7V4 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A13PP0C7W8 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A14PP0C7W9 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM90A24PP0C7X0 464 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 PSKH1P11801 424 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 VDAC1P21796 283 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 ACKR3P25106 362 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FASP25445 335 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 KIR3DL2P43630 455 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 YAP1P46937 504 aaKnown RBP4.04□□□□□ -1.76
PTPN4-210ENST00000485247 CX3CR1P49238 355 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 RPS6KA3P51812 740 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 MTPNP58546 118 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 GNG3P63215 75 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 PITPNAQ00169 270 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 RUNX1Q01196 453 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 EWSR1Q01844 656 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTPN4-210ENST00000485247 CFHR3Q02985 330 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 MEF2CQ06413 473 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-210ENST00000485247 RBMY1FQ15415 496 aaKnown RBP4.04□□□□□ -1.76
PTPN4-210ENST00000485247 HLA-DRB5Q30154 266 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 KRT71Q3SY84 523 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 PRAMEF5Q5TYX0 476 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 TMEM65Q6PI78 240 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF730Q6ZMV8 503 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 LINC00322Q6ZN03 302 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-210ENST00000485247 Q6ZWC4 215 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FAM57BQ71RH2 274 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 DCXRQ7Z4W1 244 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 RTN4RL2Q86UN3 420 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 GTSCR1Q86UQ5 136 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 ZDHHC23Q8IYP9 409 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 KIRREL3Q8IZU9 778 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 MREGQ8N565 214 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF491Q8N8L2 437 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 POC1AQ8NBT0 407 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 MYOZ3Q8TDC0 251 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 KCTD7Q96MP8 289 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 NRIP2Q9BQI9 281 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 THAP7Q9BT49 309 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-210ENST00000485247 ABCG5Q9H222 651 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 OR51J1Q9H342 316 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 FN3KQ9H479 309 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 PPCSQ9HAB8 311 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 PLEKHA3Q9HB20 300 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 ABCB9Q9NP78 766 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 DNAJC27Q9NZQ0 273 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF319Q9P2F9 582 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 HAO1Q9UJM8 370 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 SLC22A13Q9Y226 551 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 SIGLEC7Q9Y286 467 aa4.04□□□□□ -1.76
PTPN4-210ENST00000485247 GMEB1Q9Y692 573 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms