RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SLC35A2P78381 396 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 EGFEM1PQ0D2K5 195 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 PLA1AQ53H76 456 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 TCTEX1D4Q5JR98 221 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 RBM48Q5RL73 367 aaKnown RBP10.43□□□□□ -0.74
HDAC6-227ENST00000485102 TMPRSS11AQ6ZMR5 421 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 COMMD2Q86X83 199 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 OR8H2Q8N162 312 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 CCDC54Q8NEL0 328 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 BBS1Q8NFJ9 593 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 FBLIM1Q8WUP2 373 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 SNX22Q96L94 193 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 ZNF714Q96N38 554 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 OR5M11Q96RB7 305 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 JAM3Q9BX67 310 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 ADGRL4Q9HBW9 690 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 SLC22A13Q9Y226 551 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 EXOSC1Q9Y3B2 195 aaKnown RBP10.43□□□□□ -0.74
HDAC6-227ENST00000485102 TSSC4Q9Y5U2 329 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-227ENST00000485102 KIAA2026Q5HYC2 2103 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 A0A1B0GTI1 187 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 PRR32B1ATL7 298 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 COL10A1Q03692 680 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 ZNF91Q05481 1191 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 ZNF322Q6U7Q0 402 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-227ENST00000485102 GDPD3Q7L5L3 318 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 TCF23Q7RTU1 214 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 ELMOD2Q8IZ81 293 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 SYS1Q8N2H4 156 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 STX19Q8N4C7 294 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 OR10H4Q8NGA5 316 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 OR14K1Q8NGZ2 314 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 TMEM80Q96HE8 168 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 AKR1E2Q96JD6 320 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 LIN7BQ9HAP6 207 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 FGF20Q9NP95 211 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-227ENST00000485102 OR14J1Q9UGF5 321 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 LINC00312Q9Y6C7 94 aa10.42□□□□□ -0.74
HDAC6-227ENST00000485102 hADV38S2A0JD32 116 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 PSMD9O00233 223 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 PF4V1P10720 104 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 CCL1P22362 96 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 GALEQ14376 348 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 TMEM95Q3KNT9 176 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 ARSJQ5FYB0 599 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-227ENST00000485102 C6orf141Q5SZD1 244 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 RNLSQ5VYX0 342 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 CENPVQ7Z7K6 275 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-227ENST00000485102 ASCC1Q8N9N2 400 aaKnown RBP10.41□□□□□ -0.74
HDAC6-227ENST00000485102 GPR173Q9NS66 373 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 IKZF2Q9UKS7 526 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 DIMT1Q9UNQ2 313 aaKnown RBP10.41□□□□□ -0.74
HDAC6-227ENST00000485102 COPS3Q9UNS2 423 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 ERGIC3Q9Y282 383 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 PCDHGB5Q9Y5G0 923 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 HILPDAQ9Y5L2 63 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 SESN1Q9Y6P5 492 aa10.41□□□□□ -0.74
HDAC6-227ENST00000485102 IGHV2-26A0A0B4J1V2 119 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 WI2-2373I1.2A0A1W2PRP0 233 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 TCRBV4S1A1TA0A5B7 111 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 METTL15A6NJ78 407 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 LOC110117498-PIK3R3F6TDL0 507 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 WBP4O75554 376 aaKnown RBP10.4□□□□□ -0.74
HDAC6-227ENST00000485102 IGHA1P01876 353 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 MRPL3P09001 348 aaKnown RBP10.4□□□□□ -0.74
HDAC6-227ENST00000485102 HTR1DP28221 377 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 EDDM3BP56851 147 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 TAS2R43P59537 309 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 KRTAP10-11P60412 298 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 MFGE8Q08431 387 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-227ENST00000485102 DYNC1I2Q13409 638 aaKnown RBP10.4□□□□□ -0.74
HDAC6-227ENST00000485102 C11orf87Q6NUJ2 197 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 ANGPTL5Q86XS5 388 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 OR4P4Q8NGL7 312 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 CNIH3Q8TBE1 160 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 APH1BQ8WW43 257 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 LGALS12Q96DT0 336 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 CEP19Q96LK0 163 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 CNBD2Q96M20 576 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 WWC2-AS2Q96NR7 200 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 CLEC7AQ9BXN2 247 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 GPR61Q9BZJ8 451 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 TMEM133Q9H2Q1 129 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 MTCH1Q9NZJ7 389 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 SNX5Q9Y5X3 404 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 R4GMQ9 66 aa10.4□□□□□ -0.74
HDAC6-227ENST00000485102 A0A1W2PQL4 384 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-227ENST00000485102 A0A1W2PRX2 142 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 TMEM82A0PJX8 343 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 F8VVB4 439 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 F8VWA3 439 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 J3QRE1 110 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 M0R129 80 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 CLIC3O95833 236 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 PF4P02776 101 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 GNAO1P09471 354 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 JUNBP17275 347 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-227ENST00000485102 ERP29P30040 261 aaKnown RBP10.39□□□□□ -0.75
HDAC6-227ENST00000485102 BRS3P32247 399 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 GABARAPL2P60520 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms