RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 RFKQ969G6 155 aa14.43□□□□□ -0.1
ATG4B-221ENST00000483778 C10orf35Q96D05 121 aa14.43□□□□□ -0.1
ATG4B-221ENST00000483778 R3HDM4Q96D70 268 aa14.43□□□□□ -0.1
ATG4B-221ENST00000483778 PELI1Q96FA3 418 aa14.43□□□□□ -0.1
ATG4B-221ENST00000483778 MBOAT4Q96T53 435 aa14.43□□□□□ -0.1
ATG4B-221ENST00000483778 MINOS1-NBL1R4GNA1 71 aa14.43□□□□□ -0.1
ATG4B-221ENST00000483778 DAPL1A0PJW8 107 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 SH2D7A6NKC9 451 aaPredicted RBP14.42□□□□□ -0.1
ATG4B-221ENST00000483778 OR4C45A6NMZ5 311 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 J3QLW9 94 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 SLC16A6O15403 523 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 ALPLP05186 524 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 ZNF19P17023 458 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 P2RX3P56373 397 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 CDC42P60953 191 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 EMX1Q04741 257 aaPredicted RBP14.42□□□□□ -0.1
ATG4B-221ENST00000483778 SCN1BQ07699 218 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 TCTEX1D4Q5JR98 221 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 Q6P435 159 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 FAM220AQ7Z4H9 259 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 NDUFA11Q86Y39 141 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 Q8IYB0 196 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 ENTHD1Q8IYW4 607 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 ABHD12Q8N2K0 398 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 HRASLS5Q96KN8 279 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 ING3Q9NXR8 418 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 PITPNC1Q9UKF7 332 aa14.42□□□□□ -0.1
ATG4B-221ENST00000483778 A0A1W2PRX2 142 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 H3BNX3 289 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 SH2D1BO14796 132 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 ZNF20P17024 532 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 PRKACBP22694 351 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 CDK2P24941 298 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 HTR1DP28221 377 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 ERP29P30040 261 aaKnown RBP14.41□□□□□ -0.1
ATG4B-221ENST00000483778 C10orf99Q6UWK7 81 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 TRAPPC6BQ86SZ2 158 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 LHFPL3Q86UP9 236 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 OR13C9Q8NGT0 318 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 CORO2AQ92828 525 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 COQ2Q96H96 371 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 OPALINQ96PE5 141 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 ISG20L2Q9H9L3 353 aaKnown RBP14.41□□□□□ -0.1
ATG4B-221ENST00000483778 ZNF286AQ9HBT8 521 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 IMPAD1Q9NX62 359 aa14.41□□□□□ -0.1
ATG4B-221ENST00000483778 UBE2J1Q9Y385 318 aaPredicted RBP14.41□□□□□ -0.1
ATG4B-221ENST00000483778 E9PI62 339 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 KDM4BO94953 1096 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 IGLV1-47P01700 117 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 AMY1AP04745 511 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 AMY2AP04746 511 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 HTR1AP08908 422 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 LMO1P25800 156 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 VDAC2P45880 294 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-221ENST00000483778 SNRPGP62308 76 aaKnown RBP14.4□□□□□ -0.1
ATG4B-221ENST00000483778 CD83Q01151 205 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 CDK5R1Q15078 307 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 SPIN3Q5JUX0 258 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 SLC25A30Q5SVS4 291 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 LHFPL2Q6ZUX7 228 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 KCTD20Q7Z5Y7 419 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 DTX3Q8N9I9 347 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 OR5AU1Q8NGC0 362 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 OR13C3Q8NGS6 347 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 TRUB1Q8WWH5 349 aaKnown RBP14.4□□□□□ -0.1
ATG4B-221ENST00000483778 LGALS12Q96DT0 336 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 C4orf36Q96KX1 117 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 ZNF649Q9BS31 505 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 DPM3Q9P2X0 92 aa14.4□□□□□ -0.1
ATG4B-221ENST00000483778 EXOGQ9Y2C4 368 aaKnown RBP14.4□□□□□ -0.1
ATG4B-221ENST00000483778 EI24O14681 340 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 ATP5HO75947 161 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 CYB5AP00167 134 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 GABRB1P18505 474 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 RASSF2P50749 326 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 CCR9P51686 369 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 ALKBH1Q13686 389 aaKnown RBP14.39□□□□□ -0.11
ATG4B-221ENST00000483778 ARSJQ5FYB0 599 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-221ENST00000483778 HEPN1Q6WQI6 88 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 ACBD7Q8N6N7 88 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 SPSB1Q96BD6 273 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 COMMD4Q9H0A8 199 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 PPIL3Q9H2H8 161 aaKnown RBP14.39□□□□□ -0.11
ATG4B-221ENST00000483778 EXOSC4Q9NPD3 245 aaKnown RBP14.39□□□□□ -0.11
ATG4B-221ENST00000483778 HHLA2Q9UM44 414 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 MYRFQ9Y2G1 1151 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 DNAH3Q8TD57 4116 aa14.39□□□□□ -0.11
ATG4B-221ENST00000483778 LY6LH3BQJ8 138 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 SLC33A1O00400 549 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-221ENST00000483778 MT-ND2P03891 347 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 ZP1P60852 638 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 BDH1Q02338 343 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 IL18R1Q13478 541 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 C17orf58Q2M2W7 97 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 PHF21AQ96BD5 680 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 ZCCHC4Q9H5U6 513 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 AMBNQ9NP70 447 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 GLS2Q9UI32 602 aa14.38□□□□□ -0.11
ATG4B-221ENST00000483778 TRGV10A0A0A0MS01 117 aa14.37□□□□□ -0.11
ATG4B-221ENST00000483778 ODAMA1E959 279 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms