RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 KITLGP21583 273 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 GLRA1P23415 457 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 MPV17P39210 176 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 SEC61A1P61619 476 aaKnown RBP11.28□□□□□ -0.6
CPNE1-225ENST00000483495 BAMBIQ13145 260 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 ALKBH6Q3KRA9 238 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 C3orf36Q3SXR2 165 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 TIMM23BQ5SRD1 257 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 CLEC18BQ6UXF7 455 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 FAM58AQ8N1B3 248 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 LILRB4Q8NHJ6 448 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 ADAT1Q9BUB4 502 aaKnown RBP11.28□□□□□ -0.6
CPNE1-225ENST00000483495 LIME1Q9H400 295 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 CUL9Q8IWT3 2517 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 FAM221AA4D161 298 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 RFPL4AA6NLU0 287 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 TMEM210A6NLX4 147 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 RFPL4AL1F8VTS6 287 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 RHBDL1O75783 438 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 CTSDP07339 412 aaPredicted RBP11.27□□□□□ -0.6
CPNE1-225ENST00000483495 ACAA1P09110 424 aaPredicted RBP11.27□□□□□ -0.6
CPNE1-225ENST00000483495 CXCL2P19875 107 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 C4BPBP20851 252 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 GMFBP60983 142 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 ERVK11-1P61568 191 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 IKZF1Q13422 519 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 C1QTNF12Q5T7M4 302 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 MBNL2Q5VZF2 373 aaKnown RBP11.27□□□□□ -0.6
CPNE1-225ENST00000483495 SLC22A25Q6T423 547 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 Q8IYB0 196 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 OR8G5Q8NG78 346 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 CASTOR1Q8WTX7 329 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 ZNF488Q96MN9 340 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 PURGQ9UJV8 347 aaKnown RBP11.27□□□□□ -0.6
CPNE1-225ENST00000483495 POLDIP2Q9Y2S7 368 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 GTF3C1Q12789 2109 aa11.27□□□□□ -0.6
CPNE1-225ENST00000483495 APC2O95996 2303 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 TRAV14DV4A0A0A6YYC5 116 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 A0A1B0GWJ7 208 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 GLI4P10075 376 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 PI3P19957 117 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 SSTR2P30874 369 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 FGL1Q08830 312 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 TEX261Q6UWH6 196 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 SCCPDHQ8NBX0 429 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 ELMOD3Q96FG2 381 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 CLEC4MQ9H2X3 399 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-225ENST00000483495 RIMS4Q9H426 269 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-225ENST00000483495 Q9N2K0 584 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 C14orf166Q9Y224 244 aaKnown RBP11.27□□□□□ -0.61
CPNE1-225ENST00000483495 U3KQ87 197 aa11.27□□□□□ -0.61
CPNE1-225ENST00000483495 INTS1Q8N201 2190 aaKnown RBP11.26□□□□□ -0.61
CPNE1-225ENST00000483495 TRBV6-6A0A0A6YYG2 114 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 TSC22D2O75157 780 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 PGAM2P15259 253 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 ZNF154Q13106 437 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 OR8G1Q15617 311 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 IGFBP7Q16270 282 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 SUMF2Q8NBJ7 301 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 NRIP2Q9BQI9 281 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 WDR13Q9H1Z4 485 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 TMEM100Q9NV29 134 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 MGAQ8IWI9 3026 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 LAMA5O15230 3695 aa11.26□□□□□ -0.61
CPNE1-225ENST00000483495 TRAV24A0A0B4J272 114 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 CCSO14618 274 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 MLNRO43193 412 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 MPC2O95563 127 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 PGA5P0DJD9 388 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 DUSP1P28562 367 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 UCP3P55916 312 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 SORDQ00796 357 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 NAAAQ02083 359 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 ZNF718Q3SXZ3 478 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 Q6P435 159 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 TMEM65Q6PI78 240 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 KCTD9Q7L273 389 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 DOLPP1Q86YN1 238 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 COQ8AQ8NI60 647 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 S100PBPQ96BU1 408 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 FXYD6Q9H0Q3 95 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 RAB18Q9NP72 206 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 POM121CA8CG34 1229 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 H0YL77 283 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 L7N2F9 121 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 M0R233 179 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 NOS1APO75052 506 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-225ENST00000483495 SLC25A4P12235 298 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 RPA2P15927 270 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 FCGR2CP31995 323 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 OPCMLQ14982 345 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 SLC9A3R2Q15599 337 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 ANKRD55Q3KP44 614 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 C3P1Q6ZMU1 363 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 CISD2Q8N5K1 135 aaKnown RBP11.25□□□□□ -0.61
CPNE1-225ENST00000483495 ZNF680Q8NEM1 530 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 OR8H1Q8NGG4 311 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 MOB3AQ96BX8 217 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 PDCD10Q9BUL8 212 aa11.25□□□□□ -0.61
CPNE1-225ENST00000483495 TLNRD1Q9H1K6 362 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms