RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 CD80P33681 288 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 GMFBP60983 142 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 MRPS10P82664 201 aaKnown RBP6.91□□□□□ -1.3
USP4-210ENST00000483212 MRPS11P82912 194 aaKnown RBP6.91□□□□□ -1.3
USP4-210ENST00000483212 PNLIPRP3Q17RR3 467 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 CDNFQ49AH0 187 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 PYDC2Q56P42 97 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 HACD4Q5VWC8 232 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 STEAP3Q658P3 488 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 STUMQ69YW2 141 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 C20orf204Q6ZNR8 217 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 C6orf201Q7Z4U5 140 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 LYSMD2Q8IV50 215 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 Q8N402 240 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 CD177Q8N6Q3 437 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 CHST4Q8NCG5 386 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 OR11L1Q8NGX0 322 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 OR52I2Q8NH67 350 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 C15orf40Q8WUR7 153 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 NUDCD2Q8WVJ2 157 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 NEU4Q8WWR8 484 aaPredicted RBP6.91□□□□□ -1.3
USP4-210ENST00000483212 HPS1Q92902 700 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 PHF21AQ96BD5 680 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 SULT4A1Q9BR01 284 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 SCPEP1Q9HB40 452 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 DECR2Q9NUI1 292 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 TMEM106BQ9NUM4 274 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 TREM2Q9NZC2 230 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 NLKQ9UBE8 527 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 WIPI2Q9Y4P8 454 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 NPTNQ9Y639 398 aa6.91□□□□□ -1.3
USP4-210ENST00000483212 ICE1Q9Y2F5 2266 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 IGHV3OR15-7A0A075B7D8 119 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 A0A1W2PQ09 198 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 TMEM82A0PJX8 343 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 RFPL4AA6NLU0 287 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 OR2AT4A6NND4 320 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 SERPINE3A8MV23 424 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 RFPL4AL1F8VTS6 287 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 IFNL4K9M1U5 179 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 SULT1C2O00338 296 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 TPD52L2O43399 206 aaKnown RBP6.9□□□□□ -1.3
USP4-210ENST00000483212 ORC5O43913 435 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 PSPNO60542 156 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 ZNF737O75373 536 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 LY6HO94772 140 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 GLAP06280 429 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 CD3GP09693 182 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 FUT3P21217 361 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 COL8A2P25067 703 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 PRSS3P35030 304 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 CDKN1AP38936 164 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 CEBPDP49716 269 aaPredicted RBP6.9□□□□□ -1.3
USP4-210ENST00000483212 IKZF1Q13422 519 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 DCTN2Q13561 401 aaKnown RBP6.9□□□□□ -1.3
USP4-210ENST00000483212 ARL6IP1Q15041 203 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 SMIM21Q3B7S5 101 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 RNASE12Q5GAN4 147 aaKnown RBP6.9□□□□□ -1.3
USP4-210ENST00000483212 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 SHEQ5VZ18 495 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 BRICD5Q6PL45 260 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 GAPTQ8N292 157 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 SUMF2Q8NBJ7 301 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 C19orf18Q8NEA5 215 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 ANGPTL6Q8NI99 470 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 DYRK2Q92630 601 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 VRK1Q99986 396 aaPredicted RBP6.9□□□□□ -1.3
USP4-210ENST00000483212 THAP7Q9BT49 309 aaPredicted RBP6.9□□□□□ -1.3
USP4-210ENST00000483212 FAAP24Q9BTP7 215 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 RAB1BQ9H0U4 201 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 KLK11Q9UBX7 282 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 MTFP1Q9UDX5 166 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 AK3Q9UIJ7 227 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 TBC1D24Q9ULP9 559 aa6.9□□□□□ -1.3
USP4-210ENST00000483212 GCN1Q92616 2671 aaKnown RBP6.9□□□□□ -1.31
USP4-210ENST00000483212 A0A1B0GW55 424 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 OOEPA6NGQ2 149 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 LRRC30A6NM36 301 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 LYNX1G3V0Z9 82 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 LGALS8O00214 317 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 SIRPB1O00241 398 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 DEGS1O15121 323 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 PLA2G10O15496 165 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 NDUFS7O75251 213 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 FCN3O75636 299 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 FSTL3O95633 263 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 NAPSAO96009 420 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 LPLP06858 475 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 DUX4L2P0CJ85 424 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 DUX4L3P0CJ86 424 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 DUX4L4P0CJ87 422 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 DUX4L5P0CJ88 424 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 DUX4L6P0CJ89 424 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 DUX4L7P0CJ90 424 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 LYNX1P0DP58 116 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 ZNF44P15621 663 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 MUC1P15941 1255 aaPredicted RBP6.89□□□□□ -1.31
USP4-210ENST00000483212 NAT1P18440 290 aa6.89□□□□□ -1.31
USP4-210ENST00000483212 PRDX2P32119 198 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms