RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 PRSS8Q16651 343 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 CLEC12BQ2HXU8 276 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 MEX3BQ6ZN04 569 aaKnown RBP10.28□□□□□ -0.76
VTI1A-205ENST00000483122 ZNF66Q6ZN08 573 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 MRPL41Q8IXM3 137 aaKnown RBP10.28□□□□□ -0.76
VTI1A-205ENST00000483122 FAM185AQ8N0U4 392 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 LGI3Q8N145 548 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 TMEM217Q8N7C4 229 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 ZNF248Q8NDW4 579 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 GAL3ST4Q96RP7 486 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 PNO1Q9NRX1 252 aaKnown RBP10.28□□□□□ -0.76
VTI1A-205ENST00000483122 ZNF581Q9P0T4 197 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 CLEC1BQ9P126 229 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 SEMA5BQ9P283 1151 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 MYOTQ9UBF9 498 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 VAX2Q9UIW0 290 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 LAMP3Q9UQV4 416 aa10.28□□□□□ -0.76
VTI1A-205ENST00000483122 POLR3KQ9Y2Y1 108 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-205ENST00000483122 CCDC163A0A0D9SF12 145 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 ZNF850A8MQ14 1090 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 E9PLN8 166 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 PHF1O43189 567 aaPredicted RBP10.27□□□□□ -0.76
VTI1A-205ENST00000483122 SSSCA1O60232 199 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 PGCP20142 388 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 HNRNPKP61978 463 aaKnown RBP eCLIP10.27□□□□□ -0.76
VTI1A-205ENST00000483122 PRTGQ2VWP7 1150 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 C1orf189Q5VU69 101 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 LRP11Q86VZ4 500 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 C9orf40Q8IXQ3 194 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 TMEM252Q8N6L7 170 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 C12orf76Q8N812 135 aaPredicted RBP10.27□□□□□ -0.76
VTI1A-205ENST00000483122 SLC38A9Q8NBW4 561 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 OR10G4Q8NGN3 311 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 DTD1Q8TEA8 209 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 SLC2A9Q9NRM0 540 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 GPR173Q9NS66 373 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 PLEKHJ1Q9NW61 149 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 DOCK8Q8NF50 2099 aa10.27□□□□□ -0.76
VTI1A-205ENST00000483122 SHISA7A6NL88 538 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 TMEM210A6NLX4 147 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 HBE1P02100 147 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 APODP05090 189 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 RPLP1P05386 114 aaKnown RBP10.27□□□□□ -0.77
VTI1A-205ENST00000483122 PFN1P07737 140 aaKnown RBP10.27□□□□□ -0.77
VTI1A-205ENST00000483122 GAGE1Q13065 139 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 IQCJQ1A5X6 159 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 ZNF774Q6NX45 483 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 C16orf82Q7Z2V1 217 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 MAML2Q8IZL2 1156 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-205ENST00000483122 TMEM37Q8WXS4 190 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 ZNF665Q9H7R5 613 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 LRFN1Q9P244 771 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 LHFPL6Q9Y693 200 aa10.27□□□□□ -0.77
VTI1A-205ENST00000483122 SCGB1D1O95968 90 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 ADH1BP00325 375 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 GALNSP34059 522 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 LTBRP36941 435 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 OR3A1P47881 315 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 PDLIM4P50479 330 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 TLE4Q04727 773 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 ARSJQ5FYB0 599 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-205ENST00000483122 C1orf194Q5T5A4 169 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 FAM57BQ71RH2 274 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 PTPMT1Q8WUK0 201 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-205ENST00000483122 DYRK2Q92630 601 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 TP53RKQ96S44 253 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 FAAP24Q9BTP7 215 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 TM2D1Q9BX74 207 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 PLEKHF2Q9H8W4 249 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 ADAMTS9Q9P2N4 1935 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 KIR2DL5BA0A0G2JN68 375 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 KIR2DL5BA0A0G2JPC4 375 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 SEMA4FO95754 770 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 CDAP32320 146 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 DCAF7P61962 342 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 GNB2P62879 340 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 DLX2Q07687 328 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-205ENST00000483122 DMRTA1Q5VZB9 504 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 ZNF705AQ6ZN79 300 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-205ENST00000483122 KIR2DL5AQ8N109 375 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 CARFQ8N187 725 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 D2HGDHQ8N465 521 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 TMEM18Q96B42 140 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 DIRC2Q96SL1 478 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 NUDT22Q9BRQ3 303 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 TPSD1Q9BZJ3 242 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 RIMS4Q9H426 269 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-205ENST00000483122 P4HTMQ9NXG6 502 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 CISD1Q9NZ45 108 aaKnown RBP10.26□□□□□ -0.77
VTI1A-205ENST00000483122 POLR1DQ9Y2S0 133 aa10.26□□□□□ -0.77
VTI1A-205ENST00000483122 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.25□□□□□ -0.77
VTI1A-205ENST00000483122 TNFSF12O43508 249 aa10.25□□□□□ -0.77
VTI1A-205ENST00000483122 NXPH3O95157 252 aa10.25□□□□□ -0.77
VTI1A-205ENST00000483122 LINC00614P0C842 121 aa10.25□□□□□ -0.77
VTI1A-205ENST00000483122 BCL2P10415 239 aa10.25□□□□□ -0.77
VTI1A-205ENST00000483122 IRF2P14316 349 aa10.25□□□□□ -0.77
VTI1A-205ENST00000483122 IL12BP29460 328 aa10.25□□□□□ -0.77
VTI1A-205ENST00000483122 NKX2-1P43699 371 aaPredicted RBP10.25□□□□□ -0.77
VTI1A-205ENST00000483122 GNG10P50151 68 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms