RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SMCO3A2RU48 225 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 OR5H8P0DN80 308 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 C6orf201Q7Z4U5 140 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 DPPA2Q7Z7J5 298 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 D2HGDHQ8N465 521 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 OR52M1Q8NGK5 317 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 OR13D1Q8NGV5 346 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 TOMM40LQ969M1 308 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 CLDN23Q96B33 292 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 FOXD3Q9UJU5 478 aaPredicted RBP12.45□□□□□ -0.42
COL9A2-207ENST00000482722 PADI1Q9ULC6 663 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 ANKUB1A6NFN9 424 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 ADAM10O14672 748 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 ZNF41P51814 821 aaPredicted RBP12.45□□□□□ -0.42
COL9A2-207ENST00000482722 PIGPP57054 158 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 CCL7P80098 99 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 MYBPHQ13203 477 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 HLA-BQ31612 363 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 OR2G3Q8NGZ4 309 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 OR5R1Q8NH85 324 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 ZNF501Q96CX3 271 aaPredicted RBP12.45□□□□□ -0.42
COL9A2-207ENST00000482722 TVP23CQ96ET8 276 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 ZNF700Q9H0M5 742 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 LIME1Q9H400 295 aa12.45□□□□□ -0.42
COL9A2-207ENST00000482722 A8MWP6 167 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 STMND1H3BQB6 276 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 EFNA2O43921 213 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 OR5AC1P0C628 307 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 PGA4P0DJD7 388 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 PGA5P0DJD9 388 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 GABRR1P24046 479 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 ICAM4Q14773 271 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 LYSMD4Q5XG99 296 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 FAM89BQ8N5H3 189 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 OR2AJ1Q8NGZ0 328 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 FAM210BQ96KR6 192 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 SNX22Q96L94 193 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 SIRT7Q9NRC8 400 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 MCTS1Q9ULC4 181 aaKnown RBP12.44□□□□□ -0.42
COL9A2-207ENST00000482722 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 A0A1B0GWJ7 208 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 C9J4A7 227 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 RRADP55042 308 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 ST8SIA1Q92185 356 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 NIPSNAP3BQ9BS92 247 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 MRPL37Q9BZE1 423 aaKnown RBP12.44□□□□□ -0.42
COL9A2-207ENST00000482722 METTL7AQ9H8H3 244 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 A0A087WZY1 265 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 LIPT2A6NK58 231 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
COL9A2-207ENST00000482722 ATP6V0CP27449 155 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 FOXO1Q12778 655 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 TMEM187Q14656 261 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 ZNF283Q8N7M2 679 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 NAXEQ8NCW5 288 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 ZNF581Q9P0T4 197 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 AK3Q9UIJ7 227 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 WSB1Q9Y6I7 421 aa12.44□□□□□ -0.42
COL9A2-207ENST00000482722 SCAF4O95104 1147 aaKnown RBP12.43□□□□□ -0.42
COL9A2-207ENST00000482722 NUTF2P61970 127 aaKnown RBP12.43□□□□□ -0.42
COL9A2-207ENST00000482722 KISS1Q15726 138 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 FBXW12Q6X9E4 464 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 C5orf24Q7Z6I8 188 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 UEVLDQ8IX04 471 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 ZNF664Q8N3J9 261 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 OR10G3Q8NGC4 313 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 KIAA1456Q9P272 454 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 SHANK1Q9Y566 2161 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 MDKP21741 143 aaPredicted RBP12.43□□□□□ -0.42
COL9A2-207ENST00000482722 OPRM1P35372 400 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 PRSS12P56730 875 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 FXYD4P59646 89 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 EWSR1Q01844 656 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL9A2-207ENST00000482722 SLC22A25Q6T423 547 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 ANKRD37Q7Z713 158 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 DTX1Q86Y01 620 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 PIGTQ969N2 578 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 CHRNA10Q9GZZ6 450 aa12.43□□□□□ -0.42
COL9A2-207ENST00000482722 RIF1Q5UIP0 2472 aaKnown RBP12.43□□□□□ -0.42
COL9A2-207ENST00000482722 NCOA6Q14686 2063 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-207ENST00000482722 ZNF814B7Z6K7 855 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 GEMIN2O14893 280 aaKnown RBP12.42□□□□□ -0.42
COL9A2-207ENST00000482722 EREGO14944 169 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 GZMBP10144 247 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 COX5BP10606 129 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 CEACAM6P40199 344 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 RAB4BP61018 213 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 PRAMEF20Q5VT98 475 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 BRICD5Q6PL45 260 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 SNIP1Q8TAD8 396 aaKnown RBP12.42□□□□□ -0.42
COL9A2-207ENST00000482722 NDUFAF3Q9BU61 184 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 OCIAD1Q9NX40 245 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 B3GAT1Q9P2W7 334 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
COL9A2-207ENST00000482722 LY6G6EA0A0G2JKS1 128 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 ST8SIA3O43173 380 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 OR2J2O76002 312 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 FGF7P21781 194 aa12.42□□□□□ -0.42
COL9A2-207ENST00000482722 APLNRP35414 380 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms