RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 GZMKP49863 264 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 RPS27AP62979 156 aaKnown RBP12.78□□□□□ -0.36
CCM2-215ENST00000482714 P2RY14Q15391 338 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 ESCO2Q56NI9 601 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 IDNKQ5T6J7 187 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 CD276Q5ZPR3 534 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 Q6P435 159 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 LYPD2Q6UXB3 125 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 ZNF841Q6ZN19 808 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 TMEM104Q8NE00 496 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 Q96M66 194 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 GAFA1Q96PS6 74 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 TMEM59Q9BXS4 323 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 SELENOIQ9C0D9 397 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 CLN8Q9UBY8 286 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 OR14J1Q9UGF5 321 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 SPATA2Q9UM82 520 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 VPS13CQ709C8 3753 aa12.78□□□□□ -0.36
CCM2-215ENST00000482714 PPIAL4CA0A0B4J2A2 164 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 DPPA5A6NC42 116 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 CCDC160A6NGH7 325 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 A8MXK9 166 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 B4DSR2 109 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 H3BMQ9 156 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 ZNF737O75373 536 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 SCGNO76038 276 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 MPIG6BO95866 241 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 OR2H2O95918 312 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 RBMXP38159 391 aaKnown RBP12.77□□□□□ -0.37
CCM2-215ENST00000482714 CLDN12P56749 244 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 HOXA4Q00056 320 aaPredicted RBP12.77□□□□□ -0.37
CCM2-215ENST00000482714 HNRNPA0Q13151 305 aaKnown RBP12.77□□□□□ -0.37
CCM2-215ENST00000482714 UNC119Q13432 240 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 WDR25Q64LD2 544 aaPredicted RBP12.77□□□□□ -0.37
CCM2-215ENST00000482714 NCOR1P1Q9H4R4 102 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 OR5V1Q9UGF6 321 aa12.77□□□□□ -0.37
CCM2-215ENST00000482714 MALRD1Q5VYJ5 2156 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 ITPR3Q14573 2671 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 MED13LQ71F56 2210 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 A0A1W2PP11 408 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 FUOMA2VDF0 154 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 DVL1O14640 695 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 GEMIN2O14893 280 aaKnown RBP12.76□□□□□ -0.37
CCM2-215ENST00000482714 TK1P04183 234 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 CSN2P05814 226 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 LIPFP07098 398 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 SLC2A2P11168 524 aaPredicted RBP12.76□□□□□ -0.37
CCM2-215ENST00000482714 ZNF44P15621 663 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 FUT3P21217 361 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 DUSP1P28562 367 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 PITPNBP48739 271 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 GNB2P62879 340 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 COL10A1Q03692 680 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 RBM39Q14498 530 aaKnown RBP12.76□□□□□ -0.37
CCM2-215ENST00000482714 ARL6IP1Q15041 203 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 TAF9Q16594 264 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 BATF2Q8N1L9 274 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
CCM2-215ENST00000482714 LPAR5Q9H1C0 372 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 BANF2Q9H503 90 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 SLC25A10Q9UBX3 287 aaPredicted RBP12.76□□□□□ -0.37
CCM2-215ENST00000482714 DOCK11Q5JSL3 2073 aa12.76□□□□□ -0.37
CCM2-215ENST00000482714 TMEM272A0A1B0GTI8 110 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 MGST3O14880 152 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 CA11O75493 328 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 OR7C1O76099 320 aaPredicted RBP12.75□□□□□ -0.37
CCM2-215ENST00000482714 ERP29P30040 261 aaKnown RBP12.75□□□□□ -0.37
CCM2-215ENST00000482714 PAX5Q02548 391 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 IKZF1Q13422 519 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 SPCS2Q15005 226 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 TMEM249Q2WGJ8 235 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 PIGYQ3MUY2 71 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 OR10K2Q6IF99 312 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 RAB12Q6IQ22 244 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 MZT2AQ6P582 158 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 LINC01356Q8N9X3 169 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 ZNRF1Q8ND25 227 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 OR56B1Q8NGI3 324 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 NDNFQ8TB73 568 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 C18orf12Q96KH6 178 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 NUDT16L1Q9BRJ7 211 aaKnown RBP12.75□□□□□ -0.37
CCM2-215ENST00000482714 TMUB1Q9BVT8 246 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 BARHL1Q9BZE3 327 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 SHARPINQ9H0F6 387 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 NARFLQ9H6Q4 476 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 RCC2Q9P258 522 aaKnown RBP12.75□□□□□ -0.37
CCM2-215ENST00000482714 CTSZQ9UBR2 303 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 HSF4Q9ULV5 492 aa12.75□□□□□ -0.37
CCM2-215ENST00000482714 A0A0A6YYH2 397 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 SMIM30A4D0T7 59 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 A6NHS1 94 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 A6NJ64 397 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 H7C1Q1 480 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 SLC33A1O00400 549 aaPredicted RBP12.74□□□□□ -0.37
CCM2-215ENST00000482714 GATA3P23771 443 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 SCN1BQ07699 218 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 CYB5R2Q6BCY4 276 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms