RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 FAM185AQ8N0U4 392 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 OR8H2Q8N162 312 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 BPIFB2Q8N4F0 458 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 Q8NFD4 153 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 OR4M1Q8NGD0 313 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 FCGR1BQ92637 280 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 C19orf12Q9NSK7 152 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 IL36GQ9NZH8 169 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 DEGS1O15121 323 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 RGS9O75916 674 aaPredicted RBP17.22■□□□□ 0.35
SEC13-217ENST00000482647 HTR3BO95264 441 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 OR2H2O95918 312 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 UCHL1P09936 223 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 IGHV4-38-2P0DP08 117 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 SRMP19623 302 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 GABRA5P31644 462 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 SCN1BQ07699 218 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 GRK1Q15835 563 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 KCTD21Q4G0X4 260 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 FAM27D1Q5T7N8 215 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 GPR157Q5UAW9 335 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 UBE2UQ5VVX9 321 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 TMEM200BQ69YZ2 307 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 C17orf107Q6ZR85 190 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 CHST4Q8NCG5 386 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 OR10K1Q8NGX5 313 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 NR1H4Q96RI1 486 aaPredicted RBP17.22■□□□□ 0.35
SEC13-217ENST00000482647 TBX15Q96SF7 602 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 UQCC2Q9BRT2 126 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 MS4A7Q9GZW8 240 aaPredicted RBP17.22■□□□□ 0.35
SEC13-217ENST00000482647 SLITRK2Q9H156 845 aa17.22■□□□□ 0.35
SEC13-217ENST00000482647 SF3B6Q9Y3B4 125 aaKnown RBP17.22■□□□□ 0.35
SEC13-217ENST00000482647 ATRQ13535 2644 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 IGHV3OR16-10A0A075B7F0 116 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 TRAV40A0A0B4J280 105 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 M0R1W7 72 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 SIRPB1O00241 398 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 ARL6IP5O75915 188 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 CSTBP04080 98 aaKnown RBP17.21■□□□□ 0.35
SEC13-217ENST00000482647 ZNF44P15621 663 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 LMO1P25800 156 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 GP2P55259 537 aaKnown RBP17.21■□□□□ 0.35
SEC13-217ENST00000482647 BPIFB3P59826 476 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 GPR176Q14439 515 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 TMEM91Q6ZNR0 172 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 OR51T1Q8NGJ9 327 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 ZNF418Q8TF45 676 aaPredicted RBP17.21■□□□□ 0.35
SEC13-217ENST00000482647 MUL1Q969V5 352 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 FOXRED1Q96CU9 486 aaPredicted RBP17.21■□□□□ 0.35
SEC13-217ENST00000482647 CHST6Q9GZX3 395 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 PPIL3Q9H2H8 161 aaKnown RBP17.21■□□□□ 0.35
SEC13-217ENST00000482647 ZNF69Q9UC07 566 aa17.21■□□□□ 0.35
SEC13-217ENST00000482647 MRPS28Q9Y2Q9 187 aaKnown RBP17.21■□□□□ 0.35
SEC13-217ENST00000482647 A0A0G2JK05 382 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 MGST3O14880 152 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 TCF21O43680 179 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 PSPNO60542 156 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 EDDM3BP56851 147 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 FABP5Q01469 135 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 SLC22A6Q4U2R8 563 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 Q6P435 159 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 GLIPR1L1Q6UWM5 242 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 VMO1Q7Z5L0 202 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 LRRTM1Q86UE6 522 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 C22orf15Q8WYQ4 148 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 METTL8Q9H825 291 aaKnown RBP17.2■□□□□ 0.34
SEC13-217ENST00000482647 NDUFB11Q9NX14 153 aa17.2■□□□□ 0.34
SEC13-217ENST00000482647 CENPVL3A0A0U1RRI6 287 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 GTF2F2P13984 249 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 PSMB9P28065 219 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 OR3A1P47881 315 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 MEF2CQ06413 473 aaPredicted RBP17.19■□□□□ 0.34
SEC13-217ENST00000482647 EDDM3AQ14507 147 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 IL13RA2Q14627 380 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 SSX1Q16384 188 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 GLT8D1Q68CQ7 371 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 AWAT2Q6E213 333 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 C9orf139Q6ZV77 190 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 LYPD6Q86Y78 171 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 OSR2Q8N2R0 312 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 Q8N7P7 452 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 OR4S1Q8NGB4 309 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 LHX4Q969G2 390 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 SLC6A7Q99884 636 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 SUCNR1Q9BXA5 334 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 ST3GAL6Q9Y274 331 aa17.19■□□□□ 0.34
SEC13-217ENST00000482647 A0A0A6YYJ9 748 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 hCG_1809904A0A1W2PP81 198 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 A0A1W2PPE2 198 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 A0A1W2PR64 198 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 A0A1W2PRV1 198 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 FUOMA2VDF0 154 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 SLC33A1O00400 549 aaPredicted RBP17.18■□□□□ 0.34
SEC13-217ENST00000482647 CCRL2O00421 344 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 SERPINA2P20848 420 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 PIGYQ3MUY2 71 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 NHLRC3Q5JS37 347 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 RBMS3Q6XE24 437 aaKnown RBP17.18■□□□□ 0.34
SEC13-217ENST00000482647 USP43Q70EL4 1123 aa17.18■□□□□ 0.34
SEC13-217ENST00000482647 OR4D6Q8NGJ1 314 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms