RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 LCN1P31025 176 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 PRKCDQ05655 676 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 TAF9Q16594 264 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 CEACAM16Q2WEN9 425 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 MRPL2Q5T653 305 aaKnown RBP2.68□□□□□ -1.98
SF3B1-210ENST00000482158 PTRHD1Q6GMV3 140 aaKnown RBP2.68□□□□□ -1.98
SF3B1-210ENST00000482158 CLEC18BQ6UXF7 455 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 LRRC6Q86X45 466 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 ATPAF2Q8N5M1 289 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 ANGPTL6Q8NI99 470 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 FXYD5Q96DB9 178 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 OR2A7Q96R45 310 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 ACBD6Q9BR61 282 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 SYT4Q9H2B2 425 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 ANXA10Q9UJ72 324 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 SDK2Q58EX2 2172 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 VWA8A3KMH1 1905 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 IGKV1OR2-108A0A075B7D4 117 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 KIR2DS1A0A191URI9 304 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 NDUFS6O75380 124 aaKnown RBP2.67□□□□□ -1.98
SF3B1-210ENST00000482158 SC5DO75845 299 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 CXorf1O96002 111 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 CD8AP01732 235 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 SNRPAP09012 282 aaKnown RBP2.67□□□□□ -1.98
SF3B1-210ENST00000482158 SLC6A1P30531 599 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 ARR3P36575 388 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 ARPC4P59998 168 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 GPR176Q14439 515 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 ANGPT1Q15389 498 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 ZNF404Q494X3 552 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 LDLRAD2Q5SZI1 272 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 LRRC34Q8IZ02 419 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 OR5H2Q8NGV7 314 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 UBA3Q8TBC4 463 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 PHOSPHO2Q8TCD6 241 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 RBPMSQ93062 196 aaKnown RBP2.67□□□□□ -1.98
SF3B1-210ENST00000482158 CIDECQ96AQ7 238 aaPredicted RBP2.67□□□□□ -1.98
SF3B1-210ENST00000482158 PPP1R36Q96LQ0 422 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 QKIQ96PU8 341 aaKnown RBP eCLIP2.67□□□□□ -1.98
SF3B1-210ENST00000482158 THTPAQ9BU02 230 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 C9orf16Q9BUW7 83 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 ACOT13Q9NPJ3 140 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 RBM22Q9NW64 420 aaKnown RBP eCLIP2.67□□□□□ -1.98
SF3B1-210ENST00000482158 FKBP14Q9NWM8 211 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 TAS2R1Q9NYW7 299 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 INSIG2Q9Y5U4 225 aa2.67□□□□□ -1.98
SF3B1-210ENST00000482158 ADCY9O60503 1353 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 OR2AT4A6NND4 320 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 C9JQL5 133 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 MYO1DO94832 1006 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 TAC1P20366 129 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 SPAM1P38567 509 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 TSPAN5P62079 268 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 FMODQ06828 376 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 SNCBQ16143 134 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 TPGS1Q6ZTW0 290 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 TMEM144Q7Z5S9 345 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 OR2K2Q8NGT1 345 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 LRRC20Q8TCA0 184 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 YIPF5Q969M3 257 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 CHMP6Q96FZ7 201 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 OR2V2Q96R30 315 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 TM2D3Q9BRN9 247 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 BEX2Q9BXY8 128 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 HDHD2Q9H0R4 259 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 OR52A5Q9H2C5 316 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 INIPQ9NRY2 104 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 SDHAF2Q9NX18 166 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 EURLQ9NYK6 297 aa2.66□□□□□ -1.98
SF3B1-210ENST00000482158 LOC389332A0A1B0GUA5 103 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 IGLL5B9A064 214 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 TRAPPC3O43617 180 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 ATP5HO75947 161 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 RLN2P04090 185 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 BGNP21810 368 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 PPP1R2P41236 205 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 SLC18A1P54219 525 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 VBP1P61758 197 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 SKP1P63208 163 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 GUSBP1Q15486 140 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 SLC9A3R2Q15599 337 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 USF2Q15853 346 aaPredicted RBP2.65□□□□□ -1.99
SF3B1-210ENST00000482158 SSX1Q16384 188 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 ACTL10Q5JWF8 245 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 IDNKQ5T6J7 187 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 PPP1R2P3Q6NXS1 205 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 FAHD1Q6P587 224 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 COPS6Q7L5N1 327 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 VAPAQ9P0L0 249 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 RBM12B-AS1Q9P1G2 102 aa2.65□□□□□ -1.99
SF3B1-210ENST00000482158 CARHSP1Q9Y2V2 147 aaKnown RBP2.65□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF706Q9Y5V0 76 aaPredicted RBP2.65□□□□□ -1.99
SF3B1-210ENST00000482158 TMEM210A6NLX4 147 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 TRPC5OSA6NMA1 111 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 GOLGA8MH3BSY2 632 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 K7EPK0 472 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 ISLRO14498 428 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 FFAR1O14842 300 aa2.64□□□□□ -1.99
SF3B1-210ENST00000482158 CALUO43852 315 aaPredicted RBP2.64□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF189O75820 626 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms