RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 SPIN3Q5JUX0 258 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 MINOS1Q5TGZ0 78 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 LPCAT4Q643R3 524 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 Q8N2B8 174 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 RNF166Q96A37 237 aaPredicted RBP12.27□□□□□ -0.45
LIMS3-203ENST00000480744 R3HDM4Q96D70 268 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 HRASLS5Q96KN8 279 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 OPALINQ96PE5 141 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 SPACA5Q96QH8 159 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 CLEC7AQ9BXN2 247 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 NEK6Q9HC98 313 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 EXOSC4Q9NPD3 245 aaKnown RBP12.27□□□□□ -0.45
LIMS3-203ENST00000480744 FRRS1LQ9P0K9 344 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 MINOS1-NBL1R4GNA1 71 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 FAM172BPA6NC97 362 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 SH2D1BO14796 132 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 SLC16A6O15403 523 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 MMP23AO75900 390 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 VDAC2P45880 294 aaPredicted RBP12.26□□□□□ -0.45
LIMS3-203ENST00000480744 DYNLT3P51808 116 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 BLCAPP62952 87 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 SCN1BQ07699 218 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 PDZK1IP1Q13113 114 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 ZNF146Q15072 292 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 LRRC36Q1X8D7 754 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 SAMD5Q5TGI4 173 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 PRAMEF5Q5TYX0 476 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 Q6ZS46 218 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 ZBTB49Q6ZSB9 765 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 UTS2BQ765I0 119 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 OR5D18Q8NGL1 313 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 OR13C3Q8NGS6 347 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 OR13C9Q8NGT0 318 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 OR10AC1Q8NH08 325 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 SPSB1Q96BD6 273 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 CITED2Q99967 270 aaPredicted RBP12.26□□□□□ -0.45
LIMS3-203ENST00000480744 MMP28Q9H239 520 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
LIMS3-203ENST00000480744 HMG20AQ9NP66 347 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 ING3Q9NXR8 418 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 NKX1-2Q9UD57 310 aaPredicted RBP12.26□□□□□ -0.45
LIMS3-203ENST00000480744 HHLA2Q9UM44 414 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 PCDHGB5Q9Y5G0 923 aa12.26□□□□□ -0.45
LIMS3-203ENST00000480744 NOTCH3Q9UM47 2321 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 TRGV10A0A0A0MS01 117 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 H3BUI4 141 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 J3QLW9 94 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 OR2H2O95918 312 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 ALDOBP05062 364 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 ISG15P05161 165 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 ZNF19P17023 458 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 HTR1DP28221 377 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 EMX1Q04741 257 aaPredicted RBP12.25□□□□□ -0.45
LIMS3-203ENST00000480744 IL18R1Q13478 541 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 BAIAP2L2Q6UXY1 529 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 KCTD20Q7Z5Y7 419 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 NDUFA11Q86Y39 141 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 OR51A4Q8NGJ6 313 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 TRUB1Q8WWH5 349 aaKnown RBP12.25□□□□□ -0.45
LIMS3-203ENST00000480744 C4orf36Q96KX1 117 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 GAL3ST2Q9H3Q3 398 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 AASSQ9UDR5 926 aa12.25□□□□□ -0.45
LIMS3-203ENST00000480744 UBE2J1Q9Y385 318 aaPredicted RBP12.25□□□□□ -0.45
LIMS3-203ENST00000480744 IGKV1-12A0A0C4DH73 117 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 FUOMA2VDF0 154 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 IGKV1D-12P01611 117 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 ZNF44P15621 663 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 CDK2P24941 298 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 CD24P25063 80 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 ERP29P30040 261 aaKnown RBP12.24□□□□□ -0.45
LIMS3-203ENST00000480744 AESQ08117 197 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 KPRPQ5T749 579 aaPredicted RBP12.24□□□□□ -0.45
LIMS3-203ENST00000480744 MEDAGQ5VYS4 303 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 OR52W1Q6IF63 320 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 FDX2Q6P4F2 183 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 RNF144BQ7Z419 303 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 ABHD12Q8N2K0 398 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 OR4F17Q8NGA8 305 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 OR4P4Q8NGL7 312 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 CAPSLQ8WWF8 208 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 PELI1Q96FA3 418 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 OR4F4Q96R69 305 aa12.24□□□□□ -0.45
LIMS3-203ENST00000480744 J3QRE1 110 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 XPNPEP2O43895 674 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 KDM4BO94953 1096 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 HCKP08631 526 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 GABRB1P18505 474 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 GLIPR1P48060 266 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 CCR9P51686 369 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 SNRPGP62308 76 aaKnown RBP12.23□□□□□ -0.45
LIMS3-203ENST00000480744 OXLD1Q5BKU9 147 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 ACBD7Q8N6N7 88 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 ZNF596Q8TC21 504 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 MRPL48Q96GC5 212 aaKnown RBP12.23□□□□□ -0.45
LIMS3-203ENST00000480744 WNT10AQ9GZT5 417 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 FAM118AQ9NWS6 357 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 DPM3Q9P2X0 92 aa12.23□□□□□ -0.45
LIMS3-203ENST00000480744 SNTNA6NMZ2 147 aa12.22□□□□□ -0.45
LIMS3-203ENST00000480744 OR4C45A6NMZ5 311 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms