RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 PRAMEF5Q5TYX0 476 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 LPCAT4Q643R3 524 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 C11orf87Q6NUJ2 197 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 SSX6Q7RTT6 188 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 ABHD12Q8N2K0 398 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 OR4X2Q8NGF9 303 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 OR5D14Q8NGL3 314 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 ZNF596Q8TC21 504 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 NEK7Q8TDX7 302 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 PYDC1Q8WXC3 89 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 UTP4Q969X6 686 aaKnown RBP5.73□□□□□ -1.49
COL17A1-205ENST00000480127 CREB3L1Q96BA8 519 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 PHF21AQ96BD5 680 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 SPSB1Q96BD6 273 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 SLC7A6OSQ96CW6 309 aaPredicted RBP5.73□□□□□ -1.49
COL17A1-205ENST00000480127 C10orf35Q96D05 121 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 HRASLS5Q96KN8 279 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 Q96MT0 163 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 SPACA5Q96QH8 159 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 OSBPL10Q9BXB5 764 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 CDCA4Q9BXL8 241 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 GABARAPL1Q9H0R8 117 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 MEGF9Q9H1U4 602 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 TMEM133Q9H2Q1 129 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 RBFOX1Q9NWB1 397 aaKnown RBP5.73□□□□□ -1.49
COL17A1-205ENST00000480127 DHDHQ9UQ10 334 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 TCF19Q9Y242 345 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 GMPPBQ9Y5P6 360 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 A0A1B0GTI1 187 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 TCRBV4S1A1TA0A5B7 111 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 MEGF11A6BM72 1044 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 NUDT19A8MXV4 375 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 LEUTXA8MZ59 168 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 SLC16A6O15403 523 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 CHST1O43916 411 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 ENTPD6O75354 484 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 IGHA1P01876 353 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 CD2P06729 351 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 CD28P10747 220 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 ATF1P18846 271 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 CDK2P24941 298 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 GBX2P52951 348 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-205ENST00000480127 P2RX3P56373 397 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 PPP3R1P63098 170 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 ATXN7L3Q14CW9 347 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-205ENST00000480127 RSU1Q15404 277 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 LTC4SQ16873 150 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 PAN3Q58A45 887 aaKnown RBP5.72□□□□□ -1.49
COL17A1-205ENST00000480127 KRBOX4Q5JUW0 171 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 MINOS1Q5TGZ0 78 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 MEDAGQ5VYS4 303 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 FOXB2Q5VYV0 432 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 TMEM42Q69YG0 159 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 CCDC144NLQ6NUI1 221 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 ZFP1Q6P2D0 407 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 CRIP3Q6Q6R5 217 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 ACBD7Q8N6N7 88 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 DNAAF1Q8NEP3 725 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 ZNF555Q8NEP9 628 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 OR2G2Q8NGZ5 317 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 OR5AK2Q8NH90 309 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 TRUB1Q8WWH5 349 aaKnown RBP5.72□□□□□ -1.49
COL17A1-205ENST00000480127 DPF1Q92782 380 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 TOMM40LQ969M1 308 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 RPEQ96AT9 228 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 EME1Q96AY2 570 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 C4orf36Q96KX1 117 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 MMP28Q9H239 520 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 HES4Q9HCC6 221 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 FAM118AQ9NWS6 357 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 CHCHD3Q9NX63 227 aaKnown RBP5.72□□□□□ -1.49
COL17A1-205ENST00000480127 MTCH1Q9NZJ7 389 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 DPM3Q9P2X0 92 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 UBE2J1Q9Y385 318 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-205ENST00000480127 AMMECR1Q9Y4X0 333 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-205ENST00000480127 MINOS1-NBL1R4GNA1 71 aa5.72□□□□□ -1.49
COL17A1-205ENST00000480127 MEIKINA0A087WXM9 373 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 ADARB2-AS1A8MUL3 147 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 C17orf98A8MV24 154 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 VGLL3A8MV65 326 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 EI24O14681 340 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 MPZL2O60487 215 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 BAG2O95816 211 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 MPIG6BO95866 241 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 OR2H2O95918 312 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 IGLV3-1P01715 115 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 CSTBP04080 98 aaKnown RBP5.71□□□□□ -1.5
COL17A1-205ENST00000480127 CCDC159P0C7I6 412 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 FAM106CPP0CH98 169 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 MYL12AP19105 171 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 RAB3AP20336 220 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 CCL1P22362 96 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 CD24P25063 80 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 C21orf33P30042 268 aaPredicted RBP5.71□□□□□ -1.5
COL17A1-205ENST00000480127 POLR2IP36954 125 aaKnown RBP5.71□□□□□ -1.5
COL17A1-205ENST00000480127 KIR3DL2P43630 455 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 NPBWR2P48146 333 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 AESQ08117 197 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 PDZK1IP1Q13113 114 aa5.71□□□□□ -1.5
COL17A1-205ENST00000480127 MED21Q13503 144 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms