RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 C15orf41Q9Y2V0 281 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 POLR3HQ9Y535 204 aaPredicted RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 V9GYY5 206 aaPredicted RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 DNAH7Q8WXX0 4024 aa3.84□□□□□ -1.8
UPF3A-205ENST00000479712 ALMS1Q8TCU4 4167 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 A0A1W2PQD3 144 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 TMEM120BA0PK00 339 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 FAM168BA1KXE4 195 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 TRPC5OSA6NMA1 111 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 PHOX2AO14813 284 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 EMC8O43402 210 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 FADS1O60427 444 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 ICOSLGO75144 302 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 UGT2B11O75310 529 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 LINC00032P0C843 101 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 PRTN3P24158 256 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 PTGDSP41222 190 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 DIO3P55073 304 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 BIDP55957 195 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 FBXW4P57775 412 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 BST1Q10588 318 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 STX3Q13277 289 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 ARL6IP1Q15041 203 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 BCL2A1Q16548 175 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 CPTPQ5TA50 214 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 AGBL2Q5U5Z8 902 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 HHATQ5VTY9 493 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 UQCC3Q6UW78 93 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 TFAP2EQ6VUC0 442 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 NPSR1Q6W5P4 371 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 ZCCHC23Q6ZST2 131 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 ACOT7LQ6ZUV0 252 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 PLCZ1Q86YW0 608 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 LYG1Q8N1E2 194 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 SIGLECL1Q8N7X8 197 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 OR8J2Q8NGG1 315 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 OR1J4Q8NGS1 313 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 FAM110BQ8TC76 370 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 ST8SIA1Q92185 356 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 TESCQ96BS2 214 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 SEC22AQ96IW7 307 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 ZFP3Q96NJ6 502 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 MS4A4EQ96PG1 132 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 TSSK3Q96PN8 268 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 STACQ99469 402 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 SORT1Q99523 831 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF184Q99676 751 aaPredicted RBP3.83□□□□□ -1.8
UPF3A-205ENST00000479712 PKIBQ9C010 78 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 RBKSQ9H477 322 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 PTGES2Q9H7Z7 377 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 TMBIM4Q9HC24 238 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 VNN3Q9NY84 501 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 NKIRAS1Q9NYS0 192 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 VSIG4Q9Y279 399 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 NPTNQ9Y639 398 aa3.83□□□□□ -1.8
UPF3A-205ENST00000479712 K7N7A8 449 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 HDAC3O15379 428 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 SCN2BO60939 215 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 IGHV3-23P01764 117 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 SEMG1P04279 462 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 CRHP06850 196 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 IL12BP29460 328 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 AQP1P29972 269 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 CALCRP30988 508 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 EVI2BP34910 448 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 MRPL19P49406 292 aaKnown RBP3.82□□□□□ -1.8
UPF3A-205ENST00000479712 DSCR4P56555 118 aaPredicted RBP3.82□□□□□ -1.8
UPF3A-205ENST00000479712 CASP8Q14790 479 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 DUSP7Q16829 419 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 PRAMEF5Q5TYX0 476 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 ANXA8L1Q5VT79 327 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 PRAMEF20Q5VT98 475 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 PRAMEF6Q5VXH4 476 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 ENPP6Q6UWR7 440 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 TMEM107Q6UX40 140 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 ANGPTL8Q6UXH0 198 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 Q6ZR54 194 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 PGAP1Q75T13 922 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 H2BFWTQ7Z2G1 175 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 HSD17B13Q7Z5P4 300 aaPredicted RBP3.82□□□□□ -1.8
UPF3A-205ENST00000479712 MTERF4Q7Z6M4 381 aaKnown RBP3.82□□□□□ -1.8
UPF3A-205ENST00000479712 PPP1R27Q86WC6 154 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 FNDC5Q8NAU1 212 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 OR10H4Q8NGA5 316 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 OR56B2PQ8NGI1 322 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 CDC26Q8NHZ8 85 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 ZPLD1Q8TCW7 415 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 DOK4Q8TEW6 326 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 TMBIM1Q969X1 311 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 PGLYRP4Q96LB8 373 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 CHRDL1Q9BU40 450 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 UGT2B28Q9BY64 529 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 CENPHQ9H3R5 247 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 PIGUQ9H490 435 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF702PQ9H963 129 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 UBQLN4Q9NRR5 601 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 BTNL2Q9UIR0 455 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 IFT52Q9Y366 437 aa3.82□□□□□ -1.8
UPF3A-205ENST00000479712 FIS1Q9Y3D6 152 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms