RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 GTF3AQ92664 365 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 MSI2Q96DH6 328 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 C18orf12Q96KH6 178 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 Q96M66 194 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 GPR61Q9BZJ8 451 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 GAR1Q9NY12 217 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 HSF4Q9ULV5 492 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 STRAPQ9Y3F4 350 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 LIPGQ9Y5X9 500 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 IGLV3-32A0A0A0MS00 114 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 RBFOX3A6NFN3 312 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 CCDC85CA6NKD9 419 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HSD17B6O14756 317 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST1H2BKO60814 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST1H2BJP06899 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 SOD3P08294 240 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST1H2BOP23527 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST1H2BBP33778 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 TAGLN2P37802 199 aaKnown RBP11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST1H2BDP58876 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST1H2BCP62807 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 EWSR1Q01844 656 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 PCOLCEQ15113 449 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST2H2BEQ16778 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 GPR157Q5UAW9 335 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF468Q5VIY5 522 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 MRPL14Q6P1L8 145 aaKnown RBP11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 OR6X1Q8NH79 312 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 TMEM171Q8WVE6 324 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HAS2Q92819 552 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST1H2BHQ93079 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 OXGR1Q96P68 337 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST1H2BNQ99877 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST1H2BMQ99879 126 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 NELFAQ9H3P2 528 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 PROK2Q9HC23 129 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF160Q9HCG1 818 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 GPR173Q9NS66 373 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 WNT16Q9UBV4 365 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 CXorf65A6NEN9 183 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF726A6NNF4 738 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 PATE3B3GLJ2 98 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 SLC33A1O00400 549 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 ONECUT2O95948 504 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 IGLV3-1P01715 115 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 ATP6V0CP27449 155 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 MSX1P28360 303 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 DEFA6Q01524 100 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST3H3Q16695 136 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 MEX3BQ6ZN04 569 aaKnown RBP11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 LIAT1Q6ZQX7 453 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 OR2G3Q8NGZ4 309 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 PISDQ9UG56 409 aa11.54□□□□□ -0.56
PDZRN3-208ENST00000479530 TOX3O15405 576 aaPredicted RBP11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 ST8SIA3O43173 380 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 DHRS3O75911 302 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 UMODP07911 640 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 S100A2P29034 98 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 DLK1P80370 383 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 HIKESHIQ53FT3 197 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 C5orf24Q7Z6I8 188 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 SLC35G3Q8N808 338 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 FADS6Q8N9I5 356 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 GALNT14Q96FL9 552 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 C14orf144Q96I85 54 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 BOD1Q96IK1 185 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 TP53RKQ96S44 253 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 CCDC163A0A0D9SF12 145 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 IGSF23A1L1A6 192 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 AQP7P3A6NL99 342 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF724A8MTY0 619 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 PHF1O43189 567 aaPredicted RBP11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 TRGC2P03986 189 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 ECI1P42126 302 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 SNAI3Q3KNW1 292 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 LYSMD4Q5XG99 296 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 Q6ZPA2 131 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF610Q8N9Z0 462 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 CLDN23Q96B33 292 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 GPHA2Q96T91 129 aa11.53□□□□□ -0.56
PDZRN3-208ENST00000479530 IGKV1-27A0A075B6S5 117 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 A0A1B0GV90 55 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 PDGFBP01127 241 aaPredicted RBP11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 PNLIPP16233 465 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 DUSP1P28562 367 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 UBE2KP61086 200 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 FBXL14Q8N1E6 418 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 OR2AE1Q8NHA4 323 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 MAGT1Q9H0U3 335 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 PARPBPQ9NWS1 579 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 V9GYS6 101 aa11.52□□□□□ -0.56
PDZRN3-208ENST00000479530 A0A1B0GWJ7 208 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 ARGFXA6NJG6 315 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 CD63P08962 238 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 SRP19P09132 144 aaKnown RBP11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 EPHA1P21709 976 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 NTF4P34130 210 aa11.52□□□□□ -0.57
PDZRN3-208ENST00000479530 MTCP1P56278 107 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms