RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 VN1R17PQ8TDU5 208 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 GNPNAT1Q96EK6 184 aaPredicted RBP18.5■□□□□ 0.55
SDF4-206ENST00000478938 VPS25Q9BRG1 176 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 SLC46A2Q9BY10 475 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 MAP1LC3B2A6NCE7 125 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 GALR2O43603 387 aaPredicted RBP18.5■□□□□ 0.55
SDF4-206ENST00000478938 SSSCA1O60232 199 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 TMEM225BP0DP42 221 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 BLVRBP30043 206 aaPredicted RBP18.5■□□□□ 0.55
SDF4-206ENST00000478938 UBE2V1Q13404 147 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 ZNF787Q6DD87 383 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 ZNF440Q8IYI8 595 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 MAP1LC3BQ9GZQ8 125 aa18.5■□□□□ 0.55
SDF4-206ENST00000478938 ANKUB1A6NFN9 424 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 TSPAN2O60636 221 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 ABCA11PQ4W5N1 156 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 FBXO42Q6P3S6 717 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 DPPA3Q6W0C5 159 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 LIAT1Q6ZQX7 453 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 GRINAQ7Z429 371 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.49■□□□□ 0.55
SDF4-206ENST00000478938 OR5AS1Q8N127 324 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 TMEM252Q8N6L7 170 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 OR4D5Q8NGN0 318 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 RAB11FIP5Q9BXF6 653 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 PLSCR2Q9NRY7 297 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 NXT1Q9UKK6 140 aaKnown RBP18.49■□□□□ 0.55
SDF4-206ENST00000478938 RNF24Q9Y225 148 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 LRRC3CA6NJW4 275 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 CCDC85CA6NKD9 419 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 SMIM10L1P0DMW3 83 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 ZNF20P17024 532 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 FXYD4P59646 89 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 RANP62826 216 aaKnown RBP18.49■□□□□ 0.55
SDF4-206ENST00000478938 BSXQ3C1V8 233 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 IRF7Q92985 503 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 SMIM10Q96HG1 83 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 S1PR5Q9H228 398 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 C11orf1Q9H5F2 150 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 NAT8Q9UHE5 227 aa18.49■□□□□ 0.55
SDF4-206ENST00000478938 MCTS1Q9ULC4 181 aaKnown RBP18.49■□□□□ 0.55
SDF4-206ENST00000478938 PPBPP02775 128 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 RPS15AP62244 130 aaKnown RBP18.48■□□□□ 0.55
SDF4-206ENST00000478938 MRPS34P82930 218 aaKnown RBP18.48■□□□□ 0.55
SDF4-206ENST00000478938 ERN2Q76MJ5 926 aaKnown RBP18.48■□□□□ 0.55
SDF4-206ENST00000478938 OR2T10Q8NGZ9 312 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 NT5CQ8TCD5 201 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 HOXB13Q92826 284 aaPredicted RBP18.48■□□□□ 0.55
SDF4-206ENST00000478938 GPER1Q99527 375 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 PECRQ9BY49 303 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 CYR61O00622 381 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 RPL27P61353 136 aaKnown RBP18.48■□□□□ 0.55
SDF4-206ENST00000478938 MEX3BQ6ZN04 569 aaKnown RBP18.48■□□□□ 0.55
SDF4-206ENST00000478938 ODF3L1Q8IXM7 274 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 ZNF519Q8TB69 540 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 TMEM9BQ9NQ34 198 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 TUBG2Q9NRH3 451 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 FAM206AQ9NX38 181 aa18.48■□□□□ 0.55
SDF4-206ENST00000478938 CLDN17P56750 224 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 GCNT2Q8N0V5 402 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 MOB3AQ96BX8 217 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 MSI2Q96DH6 328 aaKnown RBP18.47■□□□□ 0.55
SDF4-206ENST00000478938 VSTM2LQ96N03 204 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 HLA-HP01893 362 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 CTSBP07858 339 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 RPL23P62829 140 aaKnown RBP18.47■□□□□ 0.55
SDF4-206ENST00000478938 FMODQ06828 376 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 ZNF154Q13106 437 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 FAM180AQ6UWF9 173 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 ADAMTSL4Q6UY14 1074 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 OR11L1Q8NGX0 322 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 OR51E1Q8TCB6 317 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 SPPL3Q8TCT6 385 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 GABRG3Q99928 467 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 PLEKHF2Q9H8W4 249 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 ELL3Q9HB65 397 aaPredicted RBP18.47■□□□□ 0.55
SDF4-206ENST00000478938 PILRAQ9UKJ1 303 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 CLDN16Q9Y5I7 305 aa18.47■□□□□ 0.55
SDF4-206ENST00000478938 TRAV1-1A0A0B4J248 108 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 NKX2-6A6NCS4 301 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 ZNF728P0DKX0 622 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 ZNF823P16415 610 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 ECI1P42126 302 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 UNQ5815/PRO19632Q6UWF5 114 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 COMMD2Q86X83 199 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 H1FOOQ8IZA3 346 aaPredicted RBP18.46■□□□□ 0.55
SDF4-206ENST00000478938 CISD2Q8N5K1 135 aaKnown RBP18.46■□□□□ 0.55
SDF4-206ENST00000478938 BCORP1Q8N888 145 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 CMTM2Q8TAZ6 248 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 RPUSD4Q96CM3 377 aaKnown RBP18.46■□□□□ 0.55
SDF4-206ENST00000478938 CAPNS2Q96L46 248 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 PBOV1Q9GZY1 135 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 OR51I2Q9H344 312 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 VSIRQ9H7M9 311 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 HCRTR2O43614 444 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 NXPH3O95157 252 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 WISP1O95388 367 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 CYP2G1PQ6ZSU1 146 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 IFI44Q8TCB0 444 aa18.46■□□□□ 0.55
SDF4-206ENST00000478938 MANBALQ9NQG1 85 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms