RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 NDUFB7P17568 137 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 LMO1P25800 156 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 DUSP1P28562 367 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 NHLRC3Q5JS37 347 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 GLIPR1L1Q6UWM5 242 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 OR10K1Q8NGX5 313 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 SNX22Q96L94 193 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 C1orf147Q96MC9 270 aaPredicted RBP22.14■■□□□ 1.13
CCM2-211ENST00000478582 C7orf69Q9H7B7 122 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 EXOSC4Q9NPD3 245 aaKnown RBP22.14■■□□□ 1.13
CCM2-211ENST00000478582 GHRLQ9UBU3 117 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 ARHGAP32A7KAX9 2087 aa22.14■■□□□ 1.13
CCM2-211ENST00000478582 SVEP1Q4LDE5 3571 aa22.13■■□□□ 1.13
CCM2-211ENST00000478582 DOCK11Q5JSL3 2073 aa22.13■■□□□ 1.13
CCM2-211ENST00000478582 CSTBP04080 98 aaKnown RBP22.13■■□□□ 1.13
CCM2-211ENST00000478582 SRP14P37108 136 aaKnown RBP22.13■■□□□ 1.13
CCM2-211ENST00000478582 SNU13P55769 128 aaKnown RBP22.13■■□□□ 1.13
CCM2-211ENST00000478582 IL13RA2Q14627 380 aa22.13■■□□□ 1.13
CCM2-211ENST00000478582 AWAT2Q6E213 333 aa22.13■■□□□ 1.13
CCM2-211ENST00000478582 Q6P435 159 aa22.13■■□□□ 1.13
CCM2-211ENST00000478582 GFI1Q99684 422 aa22.13■■□□□ 1.13
CCM2-211ENST00000478582 TXNL4BQ9NX01 149 aaKnown RBP22.13■■□□□ 1.13
CCM2-211ENST00000478582 OPN4Q9UHM6 478 aa22.13■■□□□ 1.13
CCM2-211ENST00000478582 TMEM82A0PJX8 343 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 OR2H2O95918 312 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 AVPP01185 164 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 SMIM18P0DKX4 95 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 CD36P16671 472 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 PSMD7P51665 324 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 CAPZA1P52907 286 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 C22orf42Q6IC83 251 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 C17orf107Q6ZR85 190 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 C1orf229Q6ZS94 237 aaPredicted RBP22.12■■□□□ 1.13
CCM2-211ENST00000478582 OSR2Q8N2R0 312 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 TEX29Q8N6K0 151 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 ASCC1Q8N9N2 400 aaKnown RBP22.12■■□□□ 1.13
CCM2-211ENST00000478582 CHST4Q8NCG5 386 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 OR5D13Q8NGL4 314 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 MRPS24Q96EL2 167 aaKnown RBP22.12■■□□□ 1.13
CCM2-211ENST00000478582 MRI1Q9BV20 369 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 SSR3Q9UNL2 185 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 AK6Q9Y3D8 172 aaKnown RBP22.12■■□□□ 1.13
CCM2-211ENST00000478582 AUP1Q9Y679 476 aa22.12■■□□□ 1.13
CCM2-211ENST00000478582 TRBV23-1A0A0A0MS06 115 aa22.11■■□□□ 1.13
CCM2-211ENST00000478582 SLC22A1O15245 554 aa22.11■■□□□ 1.13
CCM2-211ENST00000478582 UBBP0CG47 229 aa22.11■■□□□ 1.13
CCM2-211ENST00000478582 PPIAL4GP0DN37 164 aa22.11■■□□□ 1.13
CCM2-211ENST00000478582 GTF2F2P13984 249 aa22.11■■□□□ 1.13
CCM2-211ENST00000478582 SLC22A6Q4U2R8 563 aa22.11■■□□□ 1.13
CCM2-211ENST00000478582 OR8H2Q8N162 312 aa22.11■■□□□ 1.13
CCM2-211ENST00000478582 TMEM158Q8WZ71 300 aa22.11■■□□□ 1.13
CCM2-211ENST00000478582 H1FXQ92522 213 aaKnown RBP22.11■■□□□ 1.13
CCM2-211ENST00000478582 OR51E2Q9H255 320 aa22.11■■□□□ 1.13
CCM2-211ENST00000478582 SHISA3A0PJX4 238 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 RNF212BA8MTL3 300 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 PDCD5O14737 125 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 PSPNO60542 156 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 SERPINA2P20848 420 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 MYL9P24844 172 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 OR6M1Q8NGM8 313 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 SPATA3Q8NHX4 192 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 PPP1R35Q8TAP8 253 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 ST3GAL6Q9Y274 331 aa22.1■■□□□ 1.13
CCM2-211ENST00000478582 COL6A5A8TX70 2615 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 A0A0G2JK05 382 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 SLC17A2O00624 439 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 DEGS1O15121 323 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 GADD45AP24522 165 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 HTR2CP28335 458 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 RBM11P57052 281 aaKnown RBP22.09■■□□□ 1.13
CCM2-211ENST00000478582 LINC00596Q86U02 117 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 YIPF6Q96EC8 236 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 IFT22Q9H7X7 185 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 V9GY05 133 aa22.09■■□□□ 1.13
CCM2-211ENST00000478582 SIRPB1O00241 398 aa22.08■■□□□ 1.13
CCM2-211ENST00000478582 ZNF44P15621 663 aa22.08■■□□□ 1.13
CCM2-211ENST00000478582 GABRR1P24046 479 aa22.08■■□□□ 1.13
CCM2-211ENST00000478582 PIGYQ3MUY2 71 aa22.08■■□□□ 1.13
CCM2-211ENST00000478582 GDPGP1Q6ZNW5 385 aa22.08■■□□□ 1.13
CCM2-211ENST00000478582 SLC25A28Q96A46 364 aa22.08■■□□□ 1.13
CCM2-211ENST00000478582 A0A1W2PP11 408 aa22.07■■□□□ 1.12
CCM2-211ENST00000478582 SLC33A1O00400 549 aaPredicted RBP22.07■■□□□ 1.12
CCM2-211ENST00000478582 RANBP1P43487 201 aa22.07■■□□□ 1.12
CCM2-211ENST00000478582 OR3A1P47881 315 aa22.07■■□□□ 1.12
CCM2-211ENST00000478582 SCN1BQ07699 218 aa22.07■■□□□ 1.12
CCM2-211ENST00000478582 TIMM50Q3ZCQ8 353 aa22.07■■□□□ 1.12
CCM2-211ENST00000478582 KIR3DL3Q8N743 410 aa22.07■■□□□ 1.12
CCM2-211ENST00000478582 OR4S1Q8NGB4 309 aa22.07■■□□□ 1.12
CCM2-211ENST00000478582 CHCHD6Q9BRQ6 235 aa22.07■■□□□ 1.12
CCM2-211ENST00000478582 MRPS26Q9BYN8 205 aaKnown RBP22.07■■□□□ 1.12
CCM2-211ENST00000478582 KPTNQ9Y664 436 aa22.07■■□□□ 1.12
CCM2-211ENST00000478582 MXRA5Q9NR99 2828 aa22.06■■□□□ 1.12
CCM2-211ENST00000478582 MGST3O14880 152 aa22.06■■□□□ 1.12
CCM2-211ENST00000478582 FSHBP01225 129 aa22.06■■□□□ 1.12
CCM2-211ENST00000478582 CSN2P05814 226 aa22.06■■□□□ 1.12
CCM2-211ENST00000478582 CFPP27918 469 aa22.06■■□□□ 1.12
CCM2-211ENST00000478582 ERP29P30040 261 aaKnown RBP22.06■■□□□ 1.12
CCM2-211ENST00000478582 RPL31P62899 125 aaKnown RBP22.06■■□□□ 1.12
CCM2-211ENST00000478582 PDCD1Q15116 288 aa22.06■■□□□ 1.12
CCM2-211ENST00000478582 GRK1Q15835 563 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms