RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SEMA7AO75326 666 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 PGA4P0DJD7 388 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 PSG4Q00888 419 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 PDZK1IP1Q13113 114 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 RPS4Y2Q8TD47 263 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 PPP1R14DQ9NXH3 145 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 LRRC37A2A6NM11 1700 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 CREBBPQ92793 2442 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 CD1AP06126 327 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 S100A7P31151 101 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 Q3ZCU0 254 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 OR5M8Q8NGP6 311 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 CMTM2Q8TAZ6 248 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 CXXC4Q9H2H0 198 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 KIAA1456Q9P272 454 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 NUDT19A8MXV4 375 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 UMAD1C9J7I0 102 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 FCGR3BO75015 233 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 COX5AP20674 150 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 PIGYQ3MUY2 71 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 LINC01590Q5TEZ4 76 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 BHLHA15Q7RTS1 189 aaPredicted RBP12.45□□□□□ -0.42
NPHP4-208ENST00000478423 OR10Z1Q8NGY1 313 aa12.45□□□□□ -0.42
NPHP4-208ENST00000478423 KCNJ3P48549 501 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 SLC25A40Q8TBP6 338 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 CORO2AQ92828 525 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 C14orf79Q96F83 325 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 GMPPAQ96IJ6 420 aaPredicted RBP12.44□□□□□ -0.42
NPHP4-208ENST00000478423 PRR13Q9NZ81 148 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 J3QT63 122 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 TRAF3IP2O43734 574 aaPredicted RBP12.44□□□□□ -0.42
NPHP4-208ENST00000478423 OR5G3P0C626 314 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 CPN1P15169 458 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 GNG10P50151 68 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 CDCP2Q5VXM1 449 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 MDP1Q86V88 176 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 MAP6Q96JE9 813 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 MSL2Q9HCI7 577 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 A0A1W2PP11 408 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 DTYMKP23919 212 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 MDH2P40926 338 aaKnown RBP12.44□□□□□ -0.42
NPHP4-208ENST00000478423 ZNF239Q16600 458 aaKnown RBP12.44□□□□□ -0.42
NPHP4-208ENST00000478423 CLEC18BQ6UXF7 455 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 OR5A2Q8NGI9 324 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 FGF11Q92914 225 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 SAMD10Q9BYL1 202 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 NARFLQ9H6Q4 476 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 ZMIZ1Q9ULJ6 1067 aa12.44□□□□□ -0.42
NPHP4-208ENST00000478423 SF3B6Q9Y3B4 125 aaKnown RBP12.44□□□□□ -0.42
NPHP4-208ENST00000478423 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 ZNF705FA8MVS1 300 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 NPIPB9F8W1W9 429 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 HLA-DQB1P01920 261 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 ADRB1P08588 477 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 ZNF705DP0CH99 300 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 ZNF705BP0CI00 300 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 MGST1P10620 155 aaKnown RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 LPAR6P43657 344 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 RAB13P51153 203 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 PXDC1Q5TGL8 231 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 ZNF787Q6DD87 383 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 FAM122CQ6P4D5 195 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 C17orf78Q8N4C9 275 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 RXFP4Q8TDU9 374 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 HES7Q9BYE0 225 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 NKX6-2Q9C056 277 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 FAM117AQ9C073 453 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 ACTR3CQ9C0K3 210 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 OR2J1Q9GZK6 312 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 STARD10Q9Y365 291 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 WNK2Q9Y3S1 2297 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 CTSDP07339 412 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 INHBBP09529 407 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 RAB5CP51148 216 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 CLLU1Q5K131 121 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 FAHD2BQ6P2I3 314 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 FAHD2AQ96GK7 314 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 OR2D2Q9H210 308 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 CACNG5Q9UF02 275 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 ANKRD36A6QL64 1941 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 IGKV3D-11A0A0A0MRZ8 115 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 TRAV39A0A0B4J263 110 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 OR7C2O60412 319 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 CST4P01036 141 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 HFEQ30201 348 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 AVPI1Q5T686 147 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 SLC25A47Q6Q0C1 308 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 RPUSD4Q96CM3 377 aaKnown RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 TRBV5-5A0A0J9YX44 114 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 A0A0U1RQV5 110 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 ZNHIT1O43257 154 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 IGF2P01344 180 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 BCL3P20749 454 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 GNB2P62879 340 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 SURF2Q15527 256 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 INO80CQ6PI98 192 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-208ENST00000478423 SKA3Q8IX90 412 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 TMEM104Q8NE00 496 aa12.43□□□□□ -0.42
NPHP4-208ENST00000478423 MYOZ1Q9NP98 299 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms