RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 HMG20AQ9NP66 347 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 SERTAD4Q9NUC0 356 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 TAS2R3Q9NYW6 316 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 TET2Q6N021 2002 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 F8VVB4 439 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 F8VWA3 439 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 IGHA1P01876 353 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 MT-ND2P03891 347 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 ZNF44P15621 663 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 BCL3P20749 454 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 RAB13P51153 203 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 SNRPGP62308 76 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 ZNF85Q03923 595 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 KPRPQ5T749 579 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 SAMD5Q5TGI4 173 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 CCDC144NLQ6NUI1 221 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 ZFP1Q6P2D0 407 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 OR4D6Q8NGJ1 314 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 FGGYQ96C11 551 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 RNFT2Q96EX2 444 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 ADAT3Q96EY9 351 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 HRASLS5Q96KN8 279 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 COMMD4Q9H0A8 199 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 LIN7BQ9HAP6 207 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 DPM3Q9P2X0 92 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 GSTK1Q9Y2Q3 226 aa11.64□□□□□ -0.55
SMARCE1-209ENST00000478349 TGP01266 2768 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 MEX3AA1L020 520 aaKnown RBP11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 LEUTXA8MZ59 168 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 G3V4G9 280 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 M0QZK8 103 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 SIRPB1O00241 398 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 TOR1AO14656 332 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 MPZL2O60487 215 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 PSPNO60542 156 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 KDM4BO94953 1096 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 CSN2P05814 226 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 DBTP11182 482 aaKnown RBP11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 POLR2IP36954 125 aaKnown RBP11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 MNDAP41218 407 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 PTGFRP43088 359 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 OR3A1P47881 315 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 SNU13P55769 128 aaKnown RBP11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 BDH1Q02338 343 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 KPNB1Q14974 876 aaKnown RBP11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 HEPN1Q6WQI6 88 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 TCF23Q7RTU1 214 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 RDH10Q8IZV5 341 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 DYNAPQ8N1N2 210 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 ABHD12Q8N2K0 398 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 TPRX1Q8N7U7 411 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 OR52N4Q8NGI2 321 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 OR5D14Q8NGL3 314 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 OR13C9Q8NGT0 318 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 STMN2Q93045 179 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 Q96MT0 163 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 PCDHB16Q9NRJ7 776 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 INPP5EQ9NRR6 644 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 OR6C3Q9NZP0 311 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 FRRS1LQ9P0K9 344 aa11.63□□□□□ -0.55
SMARCE1-209ENST00000478349 IGKV1-9A0A0C4DH69 117 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 TMEM212A6NML5 194 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 OOSP1A8MZH6 123 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 PIN1P1O15428 100 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 MAGEB3O15480 346 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 CLIC3O95833 236 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 FADS2O95864 444 aaKnown RBP11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 OR2H2O95918 312 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 ALPLP05186 524 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 HCKP08631 526 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 CCDC159P0C7I6 412 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 CD28P10747 220 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 CDK2P24941 298 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 DUSP1P28562 367 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 NPBWR2P48146 333 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 ALDH3A2P51648 485 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 PRRX1P54821 245 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 HABP2Q14520 560 aaPredicted RBP11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 CCBE1Q6UXH8 406 aaPredicted RBP11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 SYS1Q8N2H4 156 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 OR4X2Q8NGF9 303 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 OR4P4Q8NGL7 312 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 KCTD12Q96CX2 325 aaKnown RBP11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 C4orf36Q96KX1 117 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 WNT10AQ9GZT5 417 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 ZCCHC4Q9H5U6 513 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 IL36RNQ9UBH0 155 aa11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 AMMECR1Q9Y4X0 333 aaPredicted RBP11.62□□□□□ -0.55
SMARCE1-209ENST00000478349 ODAMA1E959 279 aa11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 FAM90A22PA8MWA6 464 aa11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 J3QLW9 94 aa11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 EI24O14681 340 aa11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 PF4V1P10720 104 aa11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 ZNF19P17023 458 aa11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 LMO1P25800 156 aa11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 ALKBH1Q13686 389 aaKnown RBP11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 FBLN7Q53RD9 439 aa11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 KRBOX4Q5JUW0 171 aa11.61□□□□□ -0.55
SMARCE1-209ENST00000478349 PRAMEF5Q5TYX0 476 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms