RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 DEFB121Q5J5C9 76 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 SPIN3Q5JUX0 258 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 C10orf99Q6UWK7 81 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 RTN4RL2Q86UN3 420 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 RDH10Q8IZV5 341 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 PRSS35Q8N3Z0 413 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 OR10H4Q8NGA5 316 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 ZNF596Q8TC21 504 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 BCAS4Q8TDM0 211 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 PP6455Q8WZ26 134 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 C10orf35Q96D05 121 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 RCC1LQ96I51 464 aaKnown RBP9.38□□□□□ -0.91
CPSF7-211ENST00000477890 GAL3ST2Q9H3Q3 398 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 GSTK1Q9Y2Q3 226 aa9.38□□□□□ -0.91
CPSF7-211ENST00000477890 DNAH3Q8TD57 4116 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 IGKV1-9A0A0C4DH69 117 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 SH2D7A6NKC9 451 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-211ENST00000477890 LEUTXA8MZ59 168 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 G3V2T6 193 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 OR2F2O95006 317 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 CLIC3O95833 236 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 OR2H2O95918 312 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 UBCP0CG48 685 aaKnown RBP9.37□□□□□ -0.91
CPSF7-211ENST00000477890 HTR1FP30939 366 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 ATP6V1E1P36543 226 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 KIR3DL2P43630 455 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 KRTAP10-11P60412 298 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 CDC42P60953 191 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 BDH1Q02338 343 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 KPNB1Q14974 876 aaKnown RBP9.37□□□□□ -0.91
CPSF7-211ENST00000477890 C9orf152Q5JTZ5 239 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 KDM4DQ6B0I6 523 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 C11orf87Q6NUJ2 197 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 HEPN1Q6WQI6 88 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 FAM220AQ7Z4H9 259 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 DNAAF1Q8NEP3 725 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 ADAT3Q96EY9 351 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-211ENST00000477890 RBM14Q96PK6 669 aaKnown RBP9.37□□□□□ -0.91
CPSF7-211ENST00000477890 EXOSC4Q9NPD3 245 aaKnown RBP9.37□□□□□ -0.91
CPSF7-211ENST00000477890 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.37□□□□□ -0.91
CPSF7-211ENST00000477890 INPP5EQ9NRR6 644 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 GNG8Q9UK08 70 aa9.37□□□□□ -0.91
CPSF7-211ENST00000477890 WI2-2373I1.2A0A1W2PRP0 233 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 FUOMA2VDF0 154 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 TOR1AO14656 332 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 SH2D1BO14796 132 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 DUS4LO95620 317 aaKnown RBP9.36□□□□□ -0.91
CPSF7-211ENST00000477890 IGLV1-47P01700 117 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 ZNF20P17024 532 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 ATF1P18846 271 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 PRKACBP22694 351 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 GDNFP39905 211 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 CEACAM3P40198 252 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 GLIPR1P48060 266 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 AESQ08117 197 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 RBM39Q14498 530 aaKnown RBP9.36□□□□□ -0.91
CPSF7-211ENST00000477890 HLA-DRB5Q30154 266 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 TP53I3Q53FA7 332 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 LHFPL2Q6ZUX7 228 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 RFT1Q96AA3 541 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 ZNF286AQ9HBT8 521 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 HMG20AQ9NP66 347 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 ING3Q9NXR8 418 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 TAS2R3Q9NYW6 316 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 ENOPH1Q9UHY7 261 aa9.36□□□□□ -0.91
CPSF7-211ENST00000477890 IGKV1-12A0A0C4DH73 117 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 BUB1B-PAK6H3BSN5 160 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 IGKV1D-12P01611 117 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 AMY1AP04745 511 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 AMY2AP04746 511 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 OCM2P0CE71 109 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 OCMP0CE72 109 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-211ENST00000477890 ZNF44P15621 663 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 CD34P28906 385 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 HOXD3P31249 432 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-211ENST00000477890 PTGFRP43088 359 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 OR3A4PP47883 348 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 ZNF85Q03923 595 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 SCN1BQ07699 218 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 PDZK1IP1Q13113 114 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 ATP6AP1Q15904 470 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 TPTE2P1Q5T6R2 138 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 TMEM244Q5VVB8 128 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 UTS2BQ765I0 119 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 ZDHHC13Q8IUH4 622 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 OR4D6Q8NGJ1 314 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 OR5D18Q8NGL1 313 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 CORO2AQ92828 525 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 CREB3L1Q96BA8 519 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 FGGYQ96C11 551 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 SLC7A6OSQ96CW6 309 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-211ENST00000477890 OPALINQ96PE5 141 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 SPACA5Q96QH8 159 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 CIB1Q99828 191 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 COMMD4Q9H0A8 199 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 HHLA2Q9UM44 414 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 PCDHGB5Q9Y5G0 923 aa9.35□□□□□ -0.91
CPSF7-211ENST00000477890 ODAMA1E959 279 aa9.34□□□□□ -0.91
CPSF7-211ENST00000477890 PSMB11A5LHX3 300 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms