RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TRMT10AQ8TBZ6 339 aaKnown RBP5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 FANK1Q8TC84 345 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 TSPEARQ8WU66 669 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 CORO2AQ92828 525 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 FUZQ9BT04 418 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 ABHD6Q9BV23 337 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 TMED9Q9BVK6 235 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 ALX4Q9H161 411 aaPredicted RBP5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 RABEP2Q9H5N1 569 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 SEBOXQ9HB31 216 aaPredicted RBP5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 ACTR3BQ9P1U1 418 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 POLDIP2Q9Y2S7 368 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 CEPT1Q9Y6K0 416 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 DNAH2Q9P225 4427 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 DNAH11Q96DT5 4516 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 TRBV4-1A0A0J9YWV2 114 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 PQLC2LA1A4F0 135 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 CXorf65A6NEN9 183 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 NCBP2LA6PVI3 153 aaKnown RBP5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 LINC01619G3V211 115 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 FXYD1O00168 92 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 RGS16O15492 202 aaPredicted RBP5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 IGLV1-40P01703 118 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 IGHA1P01876 353 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 H1F0P07305 194 aaKnown RBP5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 PEX2P28328 305 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 ERP29P30040 261 aaKnown RBP5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 RAB9AP51151 201 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 P2RX3P56373 397 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 ZP1P60852 638 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 CBX1P83916 185 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 PMS2P11Q13670 270 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 CYLC2Q14093 348 aaPredicted RBP5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 GRK1Q15835 563 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 LCN1P1Q5VSP4 162 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 TRAPPC6BQ86SZ2 158 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 OR8B12Q8NGG6 310 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 TOMM40LQ969M1 308 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 MNTQ99583 582 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 SH3GL1Q99961 368 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 HSPB9Q9BQS6 159 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 CHCHD6Q9BRQ6 235 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 PARD6BQ9BYG5 372 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 NMNAT2Q9BZQ4 307 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 CHST6Q9GZX3 395 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 TOLLIPQ9H0E2 274 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 GAL3ST2Q9H3Q3 398 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 NIPAL2Q9H841 368 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 TAS2R3Q9NYW6 316 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 SLC7A11Q9UPY5 501 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 ENPP4Q9Y6X5 453 aa5.59□□□□□ -1.51
SPTLC1-205ENST00000477888 TNCP24821 2201 aa5.59□□□□□ -1.52
SPTLC1-205ENST00000477888 IGHV4OR15-8A0A075B7B6 117 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 A0A087WW49 117 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 FAM90A10PA6NDY2 464 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 MGST3O14880 152 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 MPZL2O60487 215 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 NRASP01111 189 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 GYPBP06028 91 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 OR5H8P0DN80 308 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 PITPNAQ00169 270 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 RIPPLY1Q0D2K3 151 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 IL24Q13007 206 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 KLF10Q13118 480 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 KRT71Q3SY84 523 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 IFI44LQ53G44 452 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 LINC01590Q5TEZ4 76 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 PLCXD3Q63HM9 321 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 TMEM42Q69YG0 159 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 TRPM8Q7Z2W7 1104 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 ANGPTL5Q86XS5 388 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 OR8H3Q8N146 312 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 RNF148Q8N7C7 305 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 SLC37A3Q8NCC5 494 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 ZBTB34Q8NCN2 500 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 OR9G1Q8NH87 305 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 FAM81AQ8TBF8 368 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 TRIM63Q969Q1 353 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 TMEM106AQ96A25 262 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 PKIBQ9C010 78 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 DCAF13Q9NV06 445 aaKnown RBP5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 MTCH1Q9NZJ7 389 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 STUB1Q9UNE7 303 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 HSPG2P98160 4391 aa5.58□□□□□ -1.52
SPTLC1-205ENST00000477888 UBR4Q5T4S7 5183 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 TRGV10A0A0A0MS01 117 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 A0A0U1RQV5 110 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 TMEM120BA0PK00 339 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 FAM183AA6NL82 134 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 FAM220BPB1ANY3 271 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 G3V318 75 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 J3QR06 171 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 HAND1O96004 215 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 IGLV3-1P01715 115 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 H2BFMP0C1H6 154 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 CLUP10909 449 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 ATP6V1B1P15313 513 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 SPI1P17947 270 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 RAB6AP20340 208 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms