RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PLATP00750 562 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 CSN2P05814 226 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 CTSDP07339 412 aaPredicted RBP6.78□□□□□ -1.32
VMA21-203ENST00000477649 OR5H8P0DN80 308 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 GLI4P10075 376 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 BCL3P20749 454 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 CA6P23280 308 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 GLRXP35754 106 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 ID4P47928 161 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 KCNJ3P48549 501 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 NKX2-5P52952 324 aaPredicted RBP6.78□□□□□ -1.32
VMA21-203ENST00000477649 CASP6P55212 293 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 SELENOVP59797 346 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 NAAAQ02083 359 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 PSG7Q13046 419 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 PIGYQ3MUY2 71 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 HAGHLQ6PII5 290 aaPredicted RBP6.78□□□□□ -1.32
VMA21-203ENST00000477649 GFRALQ6UXV0 394 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 NLRC3Q7RTR2 1065 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 FAM185AQ8N0U4 392 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 UXS1Q8NBZ7 420 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 OR5M8Q8NGP6 311 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 EXTL1Q92935 676 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 SLAMF9Q96A28 289 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 PIK3IP1Q96FE7 263 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 SYT3Q9BQG1 590 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 SULT4A1Q9BR01 284 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 TMEM246Q9BRR3 403 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 TLNRD1Q9H1K6 362 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 OPN3Q9H1Y3 402 aaPredicted RBP6.78□□□□□ -1.32
VMA21-203ENST00000477649 RAB18Q9NP72 206 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 MTCH1Q9NZJ7 389 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 OPN4Q9UHM6 478 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 HSPB11Q9Y547 144 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 CHD6Q8TD26 2715 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 FRYQ5TBA9 3013 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 ACACBO00763 2458 aa6.77□□□□□ -1.32
VMA21-203ENST00000477649 IGHV1-18A0A0C4DH31 117 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 VSTM5A8MXK1 200 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 SH2D1BO14796 132 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 SFT2D2O95562 160 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 NAPSAO96009 420 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 CD8AP01732 235 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 TK1P04183 234 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 CELA3BP08861 270 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 PGA5P0DJD9 388 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 ERVK11-1P61568 191 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 SRPXP78539 464 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 IKZF1Q13422 519 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 PPP1R1AQ13522 171 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 ZNF146Q15072 292 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 AADACL3Q5VUY0 350 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 RGS7BPQ6MZT1 257 aaPredicted RBP6.77□□□□□ -1.33
VMA21-203ENST00000477649 TMEM65Q6PI78 240 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 ZNF474Q6S9Z5 364 aaPredicted RBP6.77□□□□□ -1.33
VMA21-203ENST00000477649 FAM90A1Q86YD7 464 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 DOLPP1Q86YN1 238 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 SGPP2Q8IWX5 399 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 SLC38A6Q8IZM9 456 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 C9orf62Q8N4C0 152 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 CCDC71LQ8N9Z2 235 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 Q8NA96 180 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 POC1AQ8NBT0 407 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 OR10Z1Q8NGY1 313 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 LILRB1Q8NHL6 650 aaPredicted RBP6.77□□□□□ -1.33
VMA21-203ENST00000477649 MARCH1Q8TCQ1 289 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 NRIP2Q9BQI9 281 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 FGF23Q9GZV9 251 aaPredicted RBP6.77□□□□□ -1.33
VMA21-203ENST00000477649 CHMP1AQ9HD42 196 aaPredicted RBP6.77□□□□□ -1.33
VMA21-203ENST00000477649 NGBQ9NPG2 151 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 RASL12Q9NYN1 266 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 COMMD9Q9P000 198 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 PIPOXQ9P0Z9 390 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 KCNIP3Q9Y2W7 256 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 MAP1BP46821 2468 aaKnown RBP6.77□□□□□ -1.33
VMA21-203ENST00000477649 CHD8Q9HCK8 2581 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 ARHGAP21Q5T5U3 1957 aa6.77□□□□□ -1.33
VMA21-203ENST00000477649 USP24Q9UPU5 2620 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 PLSCR5A0PG75 271 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 RFPL4AA6NLU0 287 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 DBX1A6NMT0 343 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 TRDCB7Z8K6 153 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 RFPL4AL1F8VTS6 287 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 C16orf97H3BN30 126 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 K7EM74 188 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 IFNL4K9M1U5 179 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 GOSR2O14653 212 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 DEGS1O15121 323 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 TIMM8AO60220 97 aaPredicted RBP6.76□□□□□ -1.33
VMA21-203ENST00000477649 B3GALNT1O75752 331 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 WISP2O76076 250 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 PTBP3O95758 552 aaKnown RBP6.76□□□□□ -1.33
VMA21-203ENST00000477649 IGHV3-13P01766 116 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 PGAM2P15259 253 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 ZNF250P15622 560 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 PRKACAP17612 351 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 SPINK2P20155 84 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 NFYAP23511 347 aaPredicted RBP6.76□□□□□ -1.33
VMA21-203ENST00000477649 VAMP1P23763 118 aa6.76□□□□□ -1.33
VMA21-203ENST00000477649 PTAFRP25105 342 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms