RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 FAM71F2Q6NXP2 309 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 ABHD12BQ7Z5M8 362 aaPredicted RBP11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 PNKDQ8N490 385 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 OR1K1Q8NGR3 316 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 CLDN23Q96B33 292 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 FLRT3Q9NZU0 649 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 A0A1W2PNV4 684 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 MAP1LC3B2A6NCE7 125 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 TRAPPC2LH3BP13 241 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 K7N7A8 449 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 RBFOX2O43251 390 aaKnown RBP eCLIP11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 FRS3O43559 492 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 PSG1P11464 419 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 PPP1CCP36873 323 aaKnown RBP11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 CTRLP40313 264 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 CRYBA4P53673 196 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 DUSP2Q05923 314 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 MBOAT2Q6ZWT7 520 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 TMPRSS12Q86WS5 348 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 UBALD2Q8IYN6 164 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 BATF2Q8N1L9 274 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 CYB561D1Q8N8Q1 229 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 POC1AQ8NBT0 407 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 MAP1LC3BQ9GZQ8 125 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 WFDC1Q9HC57 220 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 PPIAL4AQ9Y536 164 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 LMO7DNF2Z398 122 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 STK17BO94768 372 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 PFN1P07737 140 aaKnown RBP11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 CPMP14384 443 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 MPLP40238 635 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 GABRA2P47869 451 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 CXCL12P48061 93 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 TP53I3Q53FA7 332 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 TMEM41BQ5BJD5 291 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 TMEM128Q5BJH2 165 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 PHF19Q5T6S3 580 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 OR52L1Q8NGH7 329 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 OR10S1Q8NGN2 331 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 ADAMTS15Q8TE58 950 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 OR7D2Q96RA2 312 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 TMED7Q9Y3B3 224 aa11.09□□□□□ -0.63
RTFDC1-207ENST00000477573 ZC3H12DA2A288 527 aaKnown RBP11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 TUBG1P23258 451 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 NXPH1P58417 271 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 TAS2R41P59536 307 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 VASH2Q86V25 355 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 FAM219AQ8IW50 185 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 OR5B3Q8NH48 314 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 PTPMT1Q8WUK0 201 aaPredicted RBP11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 PTX4Q96A99 478 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 SLAMF6Q96DU3 332 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 PDCD1LG2Q9BQ51 273 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 SLC13A4Q9UKG4 626 aa11.08□□□□□ -0.64
RTFDC1-207ENST00000477573 GPR75O95800 540 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 TYMSP04818 313 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 CTSDP07339 412 aaPredicted RBP11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 PPIAL4GP0DN37 164 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 TCN2P20062 427 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 PTGER1P34995 402 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 APOBEC1P41238 236 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 PPP1CAP62136 330 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 ICAM4Q14773 271 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 Q499Y3 187 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 Q6ZN92 141 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 MEX3DQ86XN8 651 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 CISD2Q8N5K1 135 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 KLHDC1Q8N7A1 406 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 RBMXL1Q96E39 390 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 SLC41A2Q96JW4 573 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 MED20Q9H944 212 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 HSF4Q9ULV5 492 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 GAGE12BA1L429 117 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 C4orf47A7E2U8 309 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 MRPL3P09001 348 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 IFI6P09912 130 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 IGLC2P0DOY2 106 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 IGLC3P0DOY3 106 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 ADRA2CP18825 462 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 TPPP2P59282 170 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 GNB2P62879 340 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 EIF2B1Q14232 305 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 LRRC10Q5BKY1 277 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 ZNF584Q8IVC4 421 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 OR2L13Q8N349 312 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 MTURNQ8N3F0 131 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 METTL27Q8N6F8 245 aaPredicted RBP11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 BHLHE23Q8NDY6 225 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 MRGPRFQ96AM1 343 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 FAM60AQ9NP50 221 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 PGPEP1Q9NXJ5 209 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 KLHL28Q9NXS3 571 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 SIT1Q9Y3P8 196 aa11.07□□□□□ -0.64
RTFDC1-207ENST00000477573 J3QR06 171 aa11.06□□□□□ -0.64
RTFDC1-207ENST00000477573 CSN2P05814 226 aa11.06□□□□□ -0.64
RTFDC1-207ENST00000477573 OR10J4P0C629 311 aa11.06□□□□□ -0.64
RTFDC1-207ENST00000477573 CTSSP25774 331 aa11.06□□□□□ -0.64
RTFDC1-207ENST00000477573 GABRA3P34903 492 aa11.06□□□□□ -0.64
RTFDC1-207ENST00000477573 ZNF92Q03936 586 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms