RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ONECUT1Q9UBC0 465 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 NLKQ9UBE8 527 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 KAAG1Q9UBP8 84 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 RPUSD1Q9UJJ7 312 aaKnown RBP6.84□□□□□ -1.31
HDAC6-221ENST00000477561 IGKV1D-17A0A075B6S4 117 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 CENPVL3A0A0U1RRI6 287 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 SHISA3A0PJX4 238 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 PQLC2LA1A4F0 135 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 NKX6-3A6NJ46 265 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 DHRS7CA6NNS2 312 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 RGS5O15539 181 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ECDO95905 644 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 PLATP00750 562 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 LIPFP07098 398 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ACAA1P09110 424 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 PPIAL4GP0DN37 164 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 PSG2P11465 335 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 MMP9P14780 707 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 NDUFB7P17568 137 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 CEBPDP49716 269 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 BMXP51813 675 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 DLX1P56177 255 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 UBA52P62987 128 aaKnown RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 IL13RA1P78552 427 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ZNF846Q147U1 533 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 UBE2V2Q15819 145 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 LRRC10Q5BKY1 277 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 IDNKQ5T6J7 187 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ATPAF1Q5TC12 328 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 DDI2Q5TDH0 399 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 GPR157Q5UAW9 335 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 METTL11BQ5VVY1 283 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 GLT8D1Q68CQ7 371 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 TMEM42Q69YG0 159 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ZNF788Q6ZQV5 615 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 LRRTM1Q86UE6 522 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ZNF573Q86YE8 665 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 CALHM1Q8IU99 346 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 PARP16Q8N5Y8 322 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ZNRF1Q8ND25 227 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 OR5D14Q8NGL3 314 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 FAM216AQ8WUB2 273 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ZFAND2BQ8WV99 257 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 TAF15Q92804 592 aaKnown RBP eCLIP6.83□□□□□ -1.325e-10■□□□□ 10.5
HDAC6-221ENST00000477561 GCDHQ92947 438 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 LHX4Q969G2 390 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 FOXRED1Q96CU9 486 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 C1orf147Q96MC9 270 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 BARHL1Q9BZE3 327 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ZCCHC4Q9H5U6 513 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 CNTD2Q9H8S5 307 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 ELL3Q9HB65 397 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 NEK6Q9HC98 313 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 TNFRSF19Q9NS68 423 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 SLC25A10Q9UBX3 287 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 AK6Q9Y3D8 172 aaKnown RBP6.83□□□□□ -1.32
HDAC6-221ENST00000477561 V9GY05 133 aa6.83□□□□□ -1.32
HDAC6-221ENST00000477561 A0A0G2JK05 382 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 SMIM30A4D0T7 59 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 DNAJC9-AS1A6NH13 148 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 RFPL4AA6NLU0 287 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 RFPL4AL1F8VTS6 287 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 J3QT63 122 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 AIPO00170 330 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 MAGEB3O15480 346 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 MAS1P04201 325 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 IGFBP3P17936 291 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-221ENST00000477561 RAB3AP20336 220 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 CAPZA1P52907 286 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 CAV3P56539 151 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 SCAND1P57086 179 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 OR10A3P58181 314 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 ZNF45Q02386 682 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 DEFB112Q30KQ8 113 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 SPANXN2Q5MJ10 180 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 C12orf54Q6X4T0 127 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 ACP7Q6ZNF0 438 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 Q6ZSR3 168 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 VMO1Q7Z5L0 202 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 CD177Q8N6Q3 437 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 POC1AQ8NBT0 407 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 LY6G5BQ8NDX9 201 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 TMEM185AQ8NFB2 350 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 PP6455Q8WZ26 134 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 FGGYQ96C11 551 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 MED30Q96HR3 178 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 CMTM3Q96MX0 182 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 DCTN5Q9BTE1 182 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 SIRPDQ9H106 197 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 DNTTIP1Q9H147 329 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 PLGRKTQ9HBL7 147 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 SIRT7Q9NRC8 400 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 TAS2R4Q9NYW5 299 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 COMMD3Q9UBI1 195 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 OR14J1Q9UGF5 321 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 DAPK2Q9UIK4 370 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 ZNF222Q9UK12 451 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 SLC7A11Q9UPY5 501 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 MAB21L2Q9Y586 359 aa6.82□□□□□ -1.32
HDAC6-221ENST00000477561 ANK2Q01484 3957 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms