RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SIRPB1O00241 398 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 SMAD7O15105 426 aaKnown RBP12.76□□□□□ -0.37
SEC13-215ENST00000477547 SIGLEC5O15389 551 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 ZNF44P15621 663 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 AMY2BP19961 511 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 PRDX2P32119 198 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 SEC61A1P61619 476 aaKnown RBP12.76□□□□□ -0.37
SEC13-215ENST00000477547 LMO4P61968 165 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 UNC119Q13432 240 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 SPCS2Q15005 226 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 ESCO2Q56NI9 601 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 NHLRC3Q5JS37 347 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 IDNKQ5T6J7 187 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 MALRD1Q5VYJ5 2156 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 CROCCP3Q8IVE0 287 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 CIARTQ8N365 385 aaPredicted RBP12.76□□□□□ -0.37
SEC13-215ENST00000477547 CD177Q8N6Q3 437 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 ASCC1Q8N9N2 400 aaKnown RBP12.76□□□□□ -0.37
SEC13-215ENST00000477547 TMEM185AQ8NFB2 350 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 KCNG3Q8TAE7 436 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 LGALS14Q8TCE9 139 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 SLC25A46Q96AG3 418 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 MRPS24Q96EL2 167 aaKnown RBP12.76□□□□□ -0.37
SEC13-215ENST00000477547 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 SELENOIQ9C0D9 397 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 KAAG1Q9UBP8 84 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 TMEM14DPA8MWL7 114 aa12.75□□□□□ -0.37
SEC13-215ENST00000477547 TNFRSF13BO14836 293 aaPredicted RBP12.75□□□□□ -0.37
SEC13-215ENST00000477547 OR7C1O76099 320 aaPredicted RBP12.75□□□□□ -0.37
SEC13-215ENST00000477547 SNRPBP14678 240 aaKnown RBP12.75□□□□□ -0.37
SEC13-215ENST00000477547 QRFPP83859 136 aa12.75□□□□□ -0.37
SEC13-215ENST00000477547 COL10A1Q03692 680 aa12.75□□□□□ -0.37
SEC13-215ENST00000477547 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
SEC13-215ENST00000477547 LINC00596Q86U02 117 aa12.75□□□□□ -0.37
SEC13-215ENST00000477547 ZNF561Q8N587 486 aa12.75□□□□□ -0.37
SEC13-215ENST00000477547 SDSLQ96GA7 329 aa12.75□□□□□ -0.37
SEC13-215ENST00000477547 Q96M66 194 aa12.75□□□□□ -0.37
SEC13-215ENST00000477547 CLN8Q9UBY8 286 aa12.75□□□□□ -0.37
SEC13-215ENST00000477547 RSL24D1Q9UHA3 163 aaKnown RBP12.75□□□□□ -0.37
SEC13-215ENST00000477547 TMEM272A0A1B0GTI8 110 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 SMIM31A0A1B0GVY4 71 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 FAM157AC9JC47 383 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 SH2D1BO14796 132 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 GEMIN2O14893 280 aaKnown RBP12.74□□□□□ -0.37
SEC13-215ENST00000477547 OR2H2O95918 312 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 CHRM2P08172 466 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 WNT2P09544 360 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 CPT2P23786 658 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 GABRR1P24046 479 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 GNB2P62879 340 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
SEC13-215ENST00000477547 SCN1BQ07699 218 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 PDCD1Q15116 288 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 TAF9Q16594 264 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 MPV17LQ2QL34 196 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 TMEM249Q2WGJ8 235 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 LRRC10Q5BKY1 277 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 ZNRF1Q8ND25 227 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 ST8SIA4Q92187 359 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 MED30Q96HR3 178 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 SSBP3Q9BWW4 388 aaPredicted RBP12.74□□□□□ -0.37
SEC13-215ENST00000477547 SLC25A10Q9UBX3 287 aaPredicted RBP12.74□□□□□ -0.37
SEC13-215ENST00000477547 MAB21L2Q9Y586 359 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 WNK2Q9Y3S1 2297 aa12.74□□□□□ -0.37
SEC13-215ENST00000477547 ABCA1O95477 2261 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 HSPB6O14558 160 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 DVL1O14640 695 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 LDLRAD4O15165 306 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 NDUFB3O43676 98 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 PAHP00439 452 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 C2orf76Q3KRA6 126 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 WDR25Q64LD2 544 aaPredicted RBP12.73□□□□□ -0.37
SEC13-215ENST00000477547 Q6P435 159 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 FGFRL1Q8N441 504 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 CHST4Q8NCG5 386 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 NICN1Q9BSH3 213 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 URM1Q9BTM9 101 aaKnown RBP12.73□□□□□ -0.37
SEC13-215ENST00000477547 BARHL1Q9BZE3 327 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 PPA2Q9H2U2 334 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 SEBOXQ9HB31 216 aaPredicted RBP12.73□□□□□ -0.37
SEC13-215ENST00000477547 LPAR2Q9HBW0 351 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 ZNF581Q9P0T4 197 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 FBLN5Q9UBX5 448 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 OR5V1Q9UGF6 321 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 ETV7Q9Y603 341 aa12.73□□□□□ -0.37
SEC13-215ENST00000477547 TMEM82A0PJX8 343 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 DPPA5A6NC42 116 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 A8MXK9 166 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 ZNF701M0R085 212 aaPredicted RBP12.72□□□□□ -0.37
SEC13-215ENST00000477547 SLC33A1O00400 549 aaPredicted RBP12.72□□□□□ -0.37
SEC13-215ENST00000477547 DEGS1O15121 323 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 PHF1O43189 567 aaPredicted RBP12.72□□□□□ -0.37
SEC13-215ENST00000477547 PSPNO60542 156 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 TMEM127O75204 238 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 ZNF737O75373 536 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 FCN3O75636 299 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 IGHV4-31P0DP07 118 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 ZNF16P17020 682 aaPredicted RBP12.72□□□□□ -0.37
SEC13-215ENST00000477547 NDUFB7P17568 137 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms