RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 MYOFQ9NZM1 2061 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 IGHV1-69-2A0A0G2JMI3 117 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 A0A1W2PPK0 400 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 A0A1W2PR48 441 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF860A6NHJ4 632 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 OR4C45A6NMZ5 311 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM250H0YL14 139 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 H0YL77 283 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 M0QYG6 137 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 NME2P1O60361 137 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 RAMP1O60894 148 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 STC2O76061 302 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 SLC2A10O95528 541 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 ETHE1O95571 254 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 EPPINO95925 133 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 HRASP01112 189 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 DBIP07108 87 aaKnown RBP4.1□□□□□ -1.75
PTCD3-212ENST00000477520 RHOCP08134 193 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 OR4A8P0C604 315 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 STAG3L3P0CL85 134 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 SMIM17P0DL12 118 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 IRF1P10914 325 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 CTSEP14091 401 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF708P17019 499 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 ADRA2CP18825 462 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 SERPINA2P20848 420 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 CORO1AP31146 461 aaKnown RBP4.1□□□□□ -1.75
PTCD3-212ENST00000477520 CDKN2AP42771 156 aaKnown RBP4.1□□□□□ -1.75
PTCD3-212ENST00000477520 RPL23AP62750 156 aaKnown RBP4.1□□□□□ -1.75
PTCD3-212ENST00000477520 BTN3A2P78410 334 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 SRPXP78539 464 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 BTG2P78543 158 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 BAXQ07812 192 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 FOXF1Q12946 379 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 GNMTQ14749 295 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 PDGFRLQ15198 375 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 PMCHL1Q16048 86 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 EXT1Q16394 746 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 DUSP5Q16690 384 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 MPV17LQ2QL34 196 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 ALG10Q5BKT4 473 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 LRRC10Q5BKY1 277 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 FAM78AQ5JUQ0 283 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 ATXN7L2Q5T6C5 722 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-212ENST00000477520 AADACL3Q5VUY0 350 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 FAM71F2Q6NXP2 309 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 TMPPEQ6ZT21 453 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 TPRG1Q6ZUI0 275 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 RD3Q7Z3Z2 195 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 AMZ2Q86W34 360 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 CXorf67Q86X51 503 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-212ENST00000477520 LYG1Q8N1E2 194 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 BATF2Q8N1L9 274 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF676Q8N7Q3 588 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 LRTM2Q8N967 370 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 OR51D1Q8NGF3 324 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 ADAMTS15Q8TE58 950 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 IGSF8Q969P0 613 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 LMLNQ96KR4 655 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 IL17FQ96PD4 163 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 GPX7Q96SL4 187 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-212ENST00000477520 NUDT9Q9BW91 350 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 ATG10Q9H0Y0 220 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 SLC25A18Q9H1K4 315 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 BPIFA1Q9NP55 256 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 PNO1Q9NRX1 252 aaKnown RBP4.1□□□□□ -1.75
PTCD3-212ENST00000477520 SPANXA1Q9NS26 97 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 OR6C3Q9NZP0 311 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 SLC7A7Q9UM01 511 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 C14orf166Q9Y224 244 aaKnown RBP4.1□□□□□ -1.75
PTCD3-212ENST00000477520 B3GALT5Q9Y2C3 310 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 TMED7Q9Y3B3 224 aa4.1□□□□□ -1.75
PTCD3-212ENST00000477520 DOCK4Q8N1I0 1966 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PRUNE2Q8WUY3 3088 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TRBV9A0A0B4J1U6 114 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 LOC102723971A0A1B0GUV8 181 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SYNDIG1LA6NDD5 238 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ANKUB1A6NFN9 424 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 OR2AG2A6NM03 316 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF727A8MUV8 499 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SERPINE3A8MV23 424 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 C2CD4DB7Z1M9 353 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TRAPPC2LH3BP13 241 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 H7BYZ3 331 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 CORTO00230 105 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SIRPB1O00241 398 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 SCDO00767 359 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 CDC42EP2O14613 210 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 ST8SIA3O43173 380 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 TRAF3IP2O43734 574 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 YPEL1O60688 119 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PITX3O75364 302 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 UPK3AO75631 287 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PIAS2O75928 621 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 OR6A2O95222 327 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 IGSF6O95976 241 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 PDGFBP01127 241 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-212ENST00000477520 IGHEP01854 428 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 HLA-HP01893 362 aa4.09□□□□□ -1.75
PTCD3-212ENST00000477520 MRPL3P09001 348 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms