RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SCN3BQ9NY72 215 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 TECRQ9NZ01 308 aaKnown RBP2.98□□□□□ -1.93
UBR3-209ENST00000477461 GLTPQ9NZD2 209 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 DNAJC27Q9NZQ0 273 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 ZNF629Q9UEG4 869 aaPredicted RBP2.98□□□□□ -1.93
UBR3-209ENST00000477461 BLOC1S6Q9UL45 172 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 MGAT4AQ9UM21 535 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 B9D1Q9UPM9 204 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 MOKQ9UQ07 419 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 RNF6Q9Y252 685 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 POLR1DQ9Y2S0 133 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 MEMO1Q9Y316 297 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 FKBP7Q9Y680 259 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 FRYLO94915 3013 aa2.98□□□□□ -1.93
UBR3-209ENST00000477461 DIDO1Q9BTC0 2240 aaKnown RBP2.98□□□□□ -1.93
UBR3-209ENST00000477461 TLN1Q9Y490 2541 aaKnown RBP2.98□□□□□ -1.93
UBR3-209ENST00000477461 PCNX1Q96RV3 2341 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 POLEQ07864 2286 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 TVP23AA6NH52 213 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 FOXI3A8MTJ6 420 aaPredicted RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 RNF212BA8MTL3 300 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 ZNF99A8MXY4 864 aaPredicted RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 DLGAP1O14490 977 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 DENRO43583 198 aaKnown RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 UPK3AO75631 287 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 TOXO94900 526 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 GYPBP06028 91 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 GNAO1P09471 354 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 CCDC159P0C7I6 412 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 OR8G3PP0DMU2 310 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 CTLA4P16410 223 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 SPI1P17947 270 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 NPR2P20594 1047 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 MSR1P21757 451 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 IL32P24001 234 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 LAP3P28838 519 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 PYCR1P32322 319 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 UQCRFS1P47985 274 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 UBE2NP61088 152 aaKnown RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 FMODQ06828 376 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 MAD2L1BPQ15013 274 aaPredicted RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 STK11Q15831 433 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 CEACAM16Q2WEN9 425 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 SLC25A35Q3KQZ1 300 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 C10orf128Q5T292 105 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 C9orf135Q5VTT2 229 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 TMEM53Q6P2H8 277 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 TFAP2EQ6VUC0 442 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 Q6ZT83 130 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 NCCRP1Q6ZVX7 275 aaPredicted RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 LUZP2Q86TE4 346 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 CCDC71Q8IV32 467 aaPredicted RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 ERI1Q8IV48 349 aaKnown RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 TMEM123Q8N131 208 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 ZNF786Q8N393 782 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 STX19Q8N4C7 294 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 BPIFB6Q8NFQ5 453 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 OR51L1Q8NGJ5 315 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 OR6N2Q8NGY6 317 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 CNIH3Q8TBE1 160 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 CA5BP1Q8WTZ4 195 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 MYDGFQ969H8 173 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 MCHR2Q969V1 340 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 STARD4Q96DR4 205 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 ZMYND19Q96E35 227 aaPredicted RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 MRPL48Q96GC5 212 aaKnown RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 CNN2Q99439 309 aaKnown RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 MRPL13Q9BYD1 178 aaKnown RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 YTHDF1Q9BYJ9 559 aaKnown RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 OPN3Q9H1Y3 402 aaPredicted RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 CRLF2Q9HC73 371 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 AMBNQ9NP70 447 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 CCNB1IP1Q9NPC3 277 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 KCNJ16Q9NPI9 418 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 ACOXLQ9NUZ1 547 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 ZNF226Q9NYT6 803 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 TAS2R16Q9NYV7 291 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 WARS2Q9UGM6 360 aaKnown RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 TPRKBQ9Y3C4 175 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 RPL36Q9Y3U8 105 aaKnown RBP2.97□□□□□ -1.93
UBR3-209ENST00000477461 LRRC42Q9Y546 428 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 USP24Q9UPU5 2620 aa2.97□□□□□ -1.93
UBR3-209ENST00000477461 CFAP54Q96N23 3096 aa2.96□□□□□ -1.93
UBR3-209ENST00000477461 PIEZO2Q9H5I5 2752 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 DMDP11532 3685 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 CACNA1CQ13936 2221 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 NCOA6Q14686 2063 aaPredicted RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 IGLV1-36A0A0B4J1U3 117 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 DAPL1A0PJW8 107 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 EFCAB10A6NFE3 127 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 C12orf71A8MTZ7 269 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 ZNF670-ZNF695F2Z2N8 137 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 RPL36A-HNRNPH2H7BZ11 118 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 DCTN6O00399 190 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 ZNF593O00488 134 aaPredicted RBP2.96□□□□□ -1.94
UBR3-209ENST00000477461 PHYHO14832 338 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 MYL12BO14950 172 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 ENTPD6O75354 484 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 TNFSF13O75888 250 aa2.96□□□□□ -1.94
UBR3-209ENST00000477461 LYZL6O75951 148 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms