RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 ATPAF2Q8N5M1 289 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 SLC25A44Q96H78 314 aaPredicted RBP1.39□□□□□ -2.19
TARDBP-208ENST00000477447 ADTRPQ96IZ2 230 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 STACQ99469 402 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 UTP23Q9BRU9 249 aaKnown RBP1.39□□□□□ -2.19
TARDBP-208ENST00000477447 GABARAPL1Q9H0R8 117 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 WDR55Q9H6Y2 383 aaPredicted RBP1.39□□□□□ -2.19
TARDBP-208ENST00000477447 ANKHQ9HCJ1 492 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 SETD1AO15047 1707 aaKnown RBP1.39□□□□□ -2.19
TARDBP-208ENST00000477447 DYSFO75923 2080 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 SSH2Q76I76 1423 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 PCNX2A6NKB5 2137 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 IGHV3-43A0A0B4J1X8 118 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 SLC5A10A0PJK1 596 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 F5H5P2 479 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 NDUFS8O00217 210 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 UPK2O00526 184 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 PRMT5O14744 637 aaPredicted RBP1.38□□□□□ -2.19
TARDBP-208ENST00000477447 CETN3O15182 167 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 GYG2O15488 501 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 PSIP1O75475 530 aaKnown RBP1.38□□□□□ -2.19
TARDBP-208ENST00000477447 DEDDO75618 318 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 YEATS4O95619 227 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 IGKV1D-33P01593 117 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 IGKV1-33P01594 117 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 S100A9P06702 114 aaKnown RBP1.38□□□□□ -2.19
TARDBP-208ENST00000477447 TPM3P06753 285 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 CTSGP08311 255 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 HTR2CP28335 458 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 CCL23P55773 120 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 CARD18P57730 90 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 ACTBL2Q562R1 376 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 FBXO48Q5FWF7 155 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 Q6ZQT7 251 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 DPPA2Q7Z7J5 298 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 GALNT10Q86SR1 603 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 LYPD6Q86Y78 171 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 GAPTQ8N292 157 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 RPRMLQ8N4K4 120 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 BPIFB6Q8NFQ5 453 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.38□□□□□ -2.19
TARDBP-208ENST00000477447 OR5P3Q8WZ94 311 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 TMIGD2Q96BF3 282 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 C19orf60Q96EN9 201 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 TRIB3Q96RU7 358 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 ANAPC13Q9BS18 74 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 HIGD2AQ9BW72 106 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 TSGA10Q9BZW7 698 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 GAL3ST2Q9H3Q3 398 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 TDRD3Q9H7E2 651 aaKnown RBP1.38□□□□□ -2.19
TARDBP-208ENST00000477447 RHOFQ9HBH0 211 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 PARVGQ9HBI0 331 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 DNAJC27Q9NZQ0 273 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 NACADO15069 1562 aa1.38□□□□□ -2.19
TARDBP-208ENST00000477447 AQRO60306 1485 aaKnown RBP eCLIP1.37□□□□□ -2.19
TARDBP-208ENST00000477447 MYO16Q9Y6X6 1858 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 A8MWP4 228 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 PSCAO43653 123 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 ENSAO43768 121 aaKnown RBP1.37□□□□□ -2.19
TARDBP-208ENST00000477447 S100A6P06703 90 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 IVLP07476 585 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 TPM1P09493 284 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 STAG3L2P0CL84 134 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 SCGB1C2P0DMR2 95 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 CBR1P16152 277 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 CPN2P22792 545 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 IL12BP29460 328 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 S100A5P33763 92 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 PSMD8P48556 350 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 PLTPP55058 493 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 GPR176Q14439 515 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 Q499Y3 187 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 CLEC12AQ5QGZ9 265 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 TMPPEQ6ZT21 453 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 CYP4Z1Q86W10 505 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 CD302Q8IX05 232 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 TRIML2Q8N7C3 387 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 OR13C9Q8NGT0 318 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 OR6K3Q8NGY3 331 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 SCGB1C1Q8TD33 95 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 DOK4Q8TEW6 326 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 TWIST2Q8WVJ9 160 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 ATP6V1G3Q96LB4 118 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 MAP1LC3CQ9BXW4 147 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 TM6SF2Q9BZW4 377 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 ZNF436Q9C0F3 470 aaPredicted RBP1.37□□□□□ -2.19
TARDBP-208ENST00000477447 PRORYQ9H606 182 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 XKR8Q9H6D3 395 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 ACOT13Q9NPJ3 140 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 IL20Q9NYY1 176 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 RBM12B-AS1Q9P1G2 102 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 SLC22A14Q9Y267 594 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 ZNF443Q9Y2A4 671 aaPredicted RBP1.37□□□□□ -2.19
TARDBP-208ENST00000477447 GMEB1Q9Y692 573 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 U3KQK5 164 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 MYO3BQ8WXR4 1341 aa1.37□□□□□ -2.19
TARDBP-208ENST00000477447 A0A1W2PNM2 257 aa1.36□□□□□ -2.19
TARDBP-208ENST00000477447 A6NED7 52 aa1.36□□□□□ -2.19
TARDBP-208ENST00000477447 RBFOX3A6NFN3 312 aa1.36□□□□□ -2.19
TARDBP-208ENST00000477447 CD300LBA8K4G0 201 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms