RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CLDN14O95500 239 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 TFF1P04155 84 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 CSN2P05814 226 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 CD3EP07766 207 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 EGR1P18146 543 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 SELENOVP59797 346 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 IL13RA2Q14627 380 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 ZNF146Q15072 292 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 SUMF2Q8NBJ7 301 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 OR4K15Q8NH41 348 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 ITLN1Q8WWA0 313 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 CMSS1Q9BQ75 279 aaKnown RBP12.19□□□□□ -0.46
COL4A6-206ENST00000477085 C20orf85Q9H1P6 137 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 IFT22Q9H7X7 185 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 DIDO1Q9BTC0 2240 aaKnown RBP12.19□□□□□ -0.46
COL4A6-206ENST00000477085 PLCE1Q9P212 2302 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 EPG5Q9HCE0 2579 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 B8ZZF3 427 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-206ENST00000477085 C1QL1O75973 258 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 NDUFB6O95139 128 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 NXPH2O95156 264 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 AMY2AP04746 511 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 FCGR3AP08637 254 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 FAUP35544 74 aaKnown RBP12.18□□□□□ -0.46
COL4A6-206ENST00000477085 SERPINF1P36955 418 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 CBX5P45973 191 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 CEBPDP49716 269 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-206ENST00000477085 C5orf24Q7Z6I8 188 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 LINC00596Q86U02 117 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 TGIF2LYQ8IUE0 185 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 Q8IYB0 196 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 BEST4Q8NFU0 473 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 OR13C8Q8NGS7 320 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 LRRC46Q96FV0 321 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 COPZ2Q9P299 210 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 ALG5Q9Y673 324 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 HCFC1P51610 2035 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 C19orf84I3L1E1 186 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 DEGS1O15121 323 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 OR2H2O95918 312 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 H2AFB2P0C5Z0 115 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 AGAP20933 346 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 BTG1P62324 171 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 BEX5Q5H9J7 111 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 ACP7Q6ZNF0 438 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 MOGAT3Q86VF5 341 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 ZNF843Q8N446 348 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 ZNF808Q8N4W9 903 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-206ENST00000477085 RDH5Q92781 318 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 TMEM204Q9BSN7 226 aa12.18□□□□□ -0.46
COL4A6-206ENST00000477085 ZNF701Q9NV72 531 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-206ENST00000477085 hCG_1807616A0A1W2PRN6 198 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 PYCARD-AS1I3L0S3 204 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 SLC33A1O00400 549 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-206ENST00000477085 ARPC1BO15143 372 aaKnown RBP12.17□□□□□ -0.46
COL4A6-206ENST00000477085 LHBP01229 141 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 AMY2BP19961 511 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 CFHR2P36980 270 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 GATA4P43694 442 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 TNFAIP6P98066 277 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-206ENST00000477085 MZT1Q08AG7 82 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 RNASE10Q5GAN6 216 aaKnown RBP12.17□□□□□ -0.46
COL4A6-206ENST00000477085 AGAP6Q5VW22 663 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 C20orf204Q6ZNR8 217 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 IDO2Q6ZQW0 420 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 GCSAMQ8N6F7 178 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 LRRC29Q8WV35 223 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 DPCDQ9BVM2 203 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-206ENST00000477085 BEX2Q9BXY8 128 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 BEX1Q9HBH7 125 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 GCM1Q9NP62 436 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 TREM2Q9NZC2 230 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 IL19Q9UHD0 177 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 ZDHHC8Q9ULC8 765 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 RNF115Q9Y4L5 304 aa12.17□□□□□ -0.46
COL4A6-206ENST00000477085 A0A0A6YYJ9 748 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 C17orf100A8MU93 164 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 SIRPB1O00241 398 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 SDCBPO00560 298 aaPredicted RBP12.16□□□□□ -0.46
COL4A6-206ENST00000477085 NAPSAO96009 420 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 GLRA1P23415 457 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 DTYMKP23919 212 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 MEF2DQ14814 521 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 VAX1Q5SQQ9 334 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 CHAC2Q8WUX2 184 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 PIK3IP1Q96FE7 263 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 GINS4Q9BRT9 223 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 CHST6Q9GZX3 395 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 FN3KRPQ9HA64 309 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 SLC2A8Q9NY64 477 aa12.16□□□□□ -0.46
COL4A6-206ENST00000477085 OR2AT4A6NND4 320 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 SRRM5B3KS81 715 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 MCRIP1C9JLW8 97 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 PSPNO60542 156 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 ADH4P08319 380 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 ZNF44P15621 663 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 ANXA7P20073 488 aaKnown RBP12.15□□□□□ -0.46
COL4A6-206ENST00000477085 TBPP20226 339 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms