RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 MT-ND4P03905 459 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 MNDAP41218 407 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 MECP2P51608 486 aaKnown RBP15.32■□□□□ 0.04
ATG4B-217ENST00000475693 OLFML2AQ68BL7 652 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 SSX8Q7RTT4 187 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 TECTBQ96PL2 329 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 MED9Q9NWA0 146 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 M0R233 179 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 GABRR1P24046 479 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 PTH2RP49190 550 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 MST1LQ2TV78 715 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 FAM76BQ5HYJ3 339 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 NLRC3Q7RTR2 1065 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 C1orf174Q8IYL3 243 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 OR2V2Q96R30 315 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 TMEM59Q9BXS4 323 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 METTL9Q9H1A3 318 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 ZNF442Q9H7R0 627 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 RAB22AQ9UL26 194 aa15.32■□□□□ 0.04
ATG4B-217ENST00000475693 HELZ2Q9BYK8 2649 aaKnown RBP15.31■□□□□ 0.04
ATG4B-217ENST00000475693 NBPF19A0A087WUL8 3843 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 OR5B21A6NL26 309 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 A6NLC8 198 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 HPXP02790 462 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 TFF1P04155 84 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 CCL8P80075 99 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 TAF9Q16594 264 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 TMEM69Q5SWH9 247 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 MEX3BQ6ZN04 569 aaKnown RBP15.31■□□□□ 0.04
ATG4B-217ENST00000475693 FBXL14Q8N1E6 418 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 OR51T1Q8NGJ9 327 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 AQP3Q92482 292 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 AUNIPQ9H7T9 357 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 HRASLSQ9HDD0 168 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 ARFGEF3Q5TH69 2177 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 MEIS3P1A6NDR6 274 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 RAB27BO00194 218 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 WNT9BO14905 357 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 IGHV1-46P01743 117 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 GIPP09681 153 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-217ENST00000475693 IGFBP2P18065 325 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 SELENOVP59797 346 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 GUCA2AQ02747 115 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 DAZAP2Q15038 168 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-217ENST00000475693 KCNG3Q8TAE7 436 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 ITLN1Q8WWA0 313 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 RAB40AQ8WXH6 277 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 WDR13Q9H1Z4 485 aa15.31■□□□□ 0.04
ATG4B-217ENST00000475693 PRSS44E7EML9 344 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 GEMIN2O14893 280 aaKnown RBP15.3■□□□□ 0.04
ATG4B-217ENST00000475693 CSTBP04080 98 aaKnown RBP15.3■□□□□ 0.04
ATG4B-217ENST00000475693 IL5P05113 134 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 GNB3P16520 340 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 TMEM50BP56557 158 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 TAS2R20P59543 309 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 ZNF672Q499Z4 452 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-217ENST00000475693 ASCL4Q6XD76 172 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 ZNF573Q86YE8 665 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 CHST4Q8NCG5 386 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 BEST4Q8NFU0 473 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 DACT3Q96B18 629 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-217ENST00000475693 CXXC4Q9H2H0 198 aa15.3■□□□□ 0.04
ATG4B-217ENST00000475693 SNRPGP15A8MWD9 76 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 ZNF205O95201 554 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 PMELP40967 661 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 NHLRC3Q5JS37 347 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 PLAC9Q5JTB6 97 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 TMEM65Q6PI78 240 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 GLDNQ6ZMI3 551 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-217ENST00000475693 TMEM204Q9BSN7 226 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 DCAF16Q9NXF7 216 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 OR2A4O95047 310 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 APOBEC3AP31941 199 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-217ENST00000475693 RAP2BP61225 183 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 RPS27AP62979 156 aaKnown RBP15.29■□□□□ 0.04
ATG4B-217ENST00000475693 FAM201AQ5SY85 155 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 OR2A7Q96R45 310 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 ST3GAL6Q9Y274 331 aa15.29■□□□□ 0.04
ATG4B-217ENST00000475693 USP9YO00507 2555 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-217ENST00000475693 hCG_1807616A0A1W2PRN6 198 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 ANKRD20A5PA0PJZ0 165 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 LRP5LA4QPB2 252 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 XRCC3O43542 346 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 CLDN1O95832 211 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 SSTR2P30874 369 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 MOGAT3Q86VF5 341 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 BOLLQ8N9W6 283 aaKnown RBP15.28■□□□□ 0.04
ATG4B-217ENST00000475693 PXT1Q8NFP0 134 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 RBPMSQ93062 196 aaKnown RBP15.28■□□□□ 0.04
ATG4B-217ENST00000475693 CST11Q9H112 138 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 C1orf123Q9NWV4 160 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 NKIRAS2Q9NYR9 191 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 A0A1B0GWJ7 208 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 TMEM235A6NFC5 223 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 SCAND1P57086 179 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 TSPAN5P62079 268 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 OPCMLQ14982 345 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 DNM1P46Q6ZS02 220 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 OSR2Q8N2R0 312 aa15.28■□□□□ 0.04
ATG4B-217ENST00000475693 MUC15Q8N387 334 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms